RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 GFI1BQ5VTD9 330 aa9.66□□□□□ -0.86
RAB5B-203ENST00000546810 C1orf158Q8N1D5 194 aa9.66□□□□□ -0.86
RAB5B-203ENST00000546810 FAM19A4Q96LR4 140 aa9.66□□□□□ -0.86
RAB5B-203ENST00000546810 LINC01587Q99440 93 aa9.66□□□□□ -0.86
RAB5B-203ENST00000546810 NIPSNAP3BQ9BS92 247 aa9.66□□□□□ -0.86
RAB5B-203ENST00000546810 C11orf68Q9H3H3 251 aaKnown RBP9.66□□□□□ -0.86
RAB5B-203ENST00000546810 GNG13Q9P2W3 67 aa9.66□□□□□ -0.86
RAB5B-203ENST00000546810 X6R8D5 127 aa9.66□□□□□ -0.86
RAB5B-203ENST00000546810 C7orf71A4D174 169 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 TMEM189A5PLL7 270 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 KLLNB2CW77 178 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 H7BYZ3 331 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 PEX7O00628 323 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 TAGLN2P37802 199 aaKnown RBP9.65□□□□□ -0.86
RAB5B-203ENST00000546810 TMEM75Q8N9X5 138 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 Q8TAT8 98 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 TXNDC17Q9BRA2 123 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 MUC4Q99102 2169 aa9.65□□□□□ -0.86
RAB5B-203ENST00000546810 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 IGHV4-28A0A0C4DH34 117 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 C11orf94C9JXX5 98 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
RAB5B-203ENST00000546810 TAS2R60P59551 318 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 FLI1Q01543 452 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-203ENST00000546810 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 LINC00336Q6ZUF6 198 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 CCDC28AQ8IWP9 274 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 Q8NAQ8 132 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-203ENST00000546810 TREM1Q9NP99 234 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 PSG8Q9UQ74 426 aa9.64□□□□□ -0.87
RAB5B-203ENST00000546810 PKHD1P08F94 4074 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 TRAV8-1A0A0A6YYK1 113 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 AKR1C3P42330 323 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 ATP5G3P48201 142 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 UBE2G1P62253 170 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 CCL20P78556 96 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 KIR3DS1Q14943 382 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 ZFAND2AQ8N6M9 145 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 PYGO2Q9BRQ0 406 aa9.63□□□□□ -0.87
RAB5B-203ENST00000546810 LOC102723971A0A1B0GUV8 181 aa9.62□□□□□ -0.87
RAB5B-203ENST00000546810 S100A9P06702 114 aaKnown RBP9.62□□□□□ -0.87
RAB5B-203ENST00000546810 RBMY1A1P0DJD3 496 aaKnown RBP9.62□□□□□ -0.87
RAB5B-203ENST00000546810 RBMY1CP0DJD4 496 aa9.62□□□□□ -0.87
RAB5B-203ENST00000546810 HTN1P15515 57 aa9.62□□□□□ -0.87
RAB5B-203ENST00000546810 BTN1A1Q13410 526 aa9.62□□□□□ -0.87
RAB5B-203ENST00000546810 RBMY1FQ15415 496 aaKnown RBP9.62□□□□□ -0.87
RAB5B-203ENST00000546810 TEX261Q6UWH6 196 aa9.62□□□□□ -0.87
RAB5B-203ENST00000546810 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
RAB5B-203ENST00000546810 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
RAB5B-203ENST00000546810 SGK494Q96LW2 274 aa9.62□□□□□ -0.87
RAB5B-203ENST00000546810 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
RAB5B-203ENST00000546810 ZNF705GA8MUZ8 300 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-203ENST00000546810 DEFB4AO15263 64 aa9.61□□□□□ -0.87
RAB5B-203ENST00000546810 ZNF493Q6ZR52 646 aa9.61□□□□□ -0.87
RAB5B-203ENST00000546810 VAX2Q9UIW0 290 aa9.61□□□□□ -0.87
RAB5B-203ENST00000546810 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 TRAV34A0A0B4J273 112 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 TRAV21A0A0B4J279 112 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 RGS13O14921 159 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 PDE6DO43924 150 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 ZNF324O75467 553 aaPredicted RBP9.6□□□□□ -0.87
RAB5B-203ENST00000546810 IGLV2-11P01706 119 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 BCL2P10415 239 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 SMUG1Q53HV7 270 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 Q6AWC8 147 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 ZNF680Q8NEM1 530 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 C11orf45Q8TAV5 145 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 C16orf74Q96GX8 76 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 LINC00479Q96M42 142 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 LINC00467Q9BRT7 94 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 ZFP30Q9Y2G7 519 aa9.6□□□□□ -0.87
RAB5B-203ENST00000546810 DYNC1H1Q14204 4646 aaKnown RBP9.59□□□□□ -0.87
RAB5B-203ENST00000546810 AGRNO00468 2067 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 TRBV6-1A0A0K0K1D8 114 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 SCO2A0A1W2PP80 73 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 SPART-AS1P0CW21 52 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 EMP1P54849 157 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-203ENST00000546810 TMEM183BQ1AE95 376 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 PRR9Q5T870 116 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 Q86TA4 180 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 EIF4E3Q8N5X7 224 aaKnown RBP9.59□□□□□ -0.87
RAB5B-203ENST00000546810 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 TMEM263Q8WUH6 116 aaKnown RBP9.59□□□□□ -0.87
RAB5B-203ENST00000546810 KLF12Q9Y4X4 402 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 FAT2Q9NYQ8 4349 aa9.59□□□□□ -0.87
RAB5B-203ENST00000546810 IGHV1OR15-1A0A075B7D0 117 aa9.58□□□□□ -0.88
RAB5B-203ENST00000546810 CBY3A6NI87 242 aa9.58□□□□□ -0.88
RAB5B-203ENST00000546810 FAM159AQ6UWV7 190 aa9.58□□□□□ -0.88
RAB5B-203ENST00000546810 TVP23CQ96ET8 276 aa9.58□□□□□ -0.88
RAB5B-203ENST00000546810 DNAH11Q96DT5 4516 aa9.57□□□□□ -0.88
RAB5B-203ENST00000546810 RBFOX3A6NFN3 312 aa9.57□□□□□ -0.88
RAB5B-203ENST00000546810 SNURFLB1AK76 121 aa9.57□□□□□ -0.88
RAB5B-203ENST00000546810 GCGP01275 180 aa9.57□□□□□ -0.88
RAB5B-203ENST00000546810 ANXA2RQ3ZCQ2 193 aa9.57□□□□□ -0.88
RAB5B-203ENST00000546810 C2CD4CQ8TF44 421 aa9.57□□□□□ -0.88
RAB5B-203ENST00000546810 C11orf52Q96A22 123 aa9.57□□□□□ -0.88
RAB5B-203ENST00000546810 C8orf49Q96NF6 230 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms