RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 P0C879 139 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 A0A1W2PRX2 142 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 PF4P02776 101 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 KLF12Q9Y4X4 402 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 KIF26AQ9ULI4 1882 aaPredicted RBP9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 TRAV8-3A0A0A6YYJ7 113 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 TRGV4A0A0C4DH28 118 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 RPL36AP83881 106 aaKnown RBP9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 C12orf74Q32Q52 190 aa9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 RPL36ALQ969Q0 106 aaKnown RBP9.66□□□□□ -0.86
NPC1L1-204ENST00000546276 CRPP02741 224 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 ANXA2RQ3ZCQ2 193 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 C1orf122Q6ZSJ8 110 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 ZNF295-AS1Q8N0V1 137 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 BPESC1Q9GZL8 116 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 OBSL1O75147 1896 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 SDHAF1A6NFY7 115 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 CTSZQ9UBR2 303 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 AMTNQ6UX39 209 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 TMEM86BQ8N661 226 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 C20orf78Q9BR46 151 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 CHCHD5Q9BSY4 110 aa9.65□□□□□ -0.86
NPC1L1-204ENST00000546276 COL6A6A6NMZ7 2263 aa9.65□□□□□ -0.87
NPC1L1-204ENST00000546276 GTF3C1Q12789 2109 aa9.65□□□□□ -0.87
NPC1L1-204ENST00000546276 IGKV1OR2-108A0A075B7D4 117 aa9.65□□□□□ -0.87
NPC1L1-204ENST00000546276 C22orf46C9J442 243 aa9.65□□□□□ -0.87
NPC1L1-204ENST00000546276 GTSF1Q8WW33 167 aa9.65□□□□□ -0.87
NPC1L1-204ENST00000546276 AZU1P20160 251 aa9.64□□□□□ -0.87
NPC1L1-204ENST00000546276 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 DYNAPQ8N1N2 210 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 CHD3Q12873 2000 aaKnown RBP9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 PRO1854Q9UHT4 67 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 H3BMM0 161 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 UBE2WQ96B02 151 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 TAX1BP3O14907 124 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 MALP21145 153 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 PRR30Q53SZ7 412 aaPredicted RBP9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 C1orf159Q96HA4 380 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 ATP6V0BQ99437 205 aa9.63□□□□□ -0.87
NPC1L1-204ENST00000546276 TRGV1A0A0A0MS02 117 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 B4DSR2 109 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 I3L2K1 104 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 TCF15Q12870 199 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 EML6Q6ZMW3 1958 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 I3L3M4 83 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 LGALS1P09382 135 aaKnown RBP9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 PLA2G2CQ5R387 149 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 PRIMA1Q86XR5 153 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 MED13Q9UHV7 2174 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 TRBV25-1A0A075B6N4 114 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 INS-IGF2F8WCM5 200 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 NDUFA4O00483 81 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 GHRHP01286 108 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 AGPAT4-IT1Q9H0P7 198 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 LEPROTO15243 131 aa9.62□□□□□ -0.87
NPC1L1-204ENST00000546276 SHISA9B4DS77 424 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 SLC25A20O43772 301 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 FGF6P10767 208 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 DSCR9P59020 149 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 RUSC1-AS1Q66K80 236 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 PHLDA1Q8WV24 401 aaPredicted RBP9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 ABCA4P78363 2273 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 PAX4O43316 350 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 PLA2G5P39877 138 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 LY6DQ14210 128 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 CFHR4Q92496 578 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 ARHGAP21Q5T5U3 1957 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 RBAKDNA6NC62 111 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 OVOL2Q9BRP0 275 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 K7EIM0 57 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 INSP01308 110 aa9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 GATA1P15976 413 aaPredicted RBP9.61□□□□□ -0.87
NPC1L1-204ENST00000546276 BOD1L2Q8IYS8 172 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 SPANXA1Q9NS26 97 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 J3QQQ9 107 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 K7EMI3 77 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 FREM1Q5H8C1 2179 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 PRSS29PA6NIE9 313 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 SAP30O75446 220 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 SYNJ2BPP57105 145 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 SPINK13Q1W4C9 94 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 RITA1Q96K30 269 aa9.6□□□□□ -0.87
NPC1L1-204ENST00000546276 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 TEX48A0A1B0GUV7 120 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 CR1LQ2VPA4 569 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 ZNF493Q6ZR52 646 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 ZNF503Q96F45 646 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 RHODO00212 210 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 BRWD1-AS2P59051 145 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 IGLL5B9A064 214 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 IGHV3-53P01767 116 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 KLK9Q9UKQ9 250 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 DOPEY2Q9Y3R5 2298 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 C2orf70A6NJV1 201 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms