RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ITPR1Q14643 2758 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 IGKV1D-37A0A075B6S9 117 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 K7ENP7 123 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 ATP6V0E1O15342 81 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 TOMM40O96008 361 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 SPINK8P0C7L1 97 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 Q86TA4 180 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 OR10AG1Q8NH19 301 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 OTORQ9NRC9 128 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 SPCS1Q9Y6A9 102 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 HECTD1Q9ULT8 2610 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 A6NDN8 102 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 H3BVH4 76 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 M0QXV9 152 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 SCGB1A1P11684 91 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 DLX6P56179 175 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 PTPRBP23467 1997 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 GAGE12HA6NDE8 117 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 F6UB75 175 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 TAX1BP3O14907 124 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 IGLV2-23P01705 113 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 FAM106AQ4KMX7 169 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 FAM169BQ8N8A8 192 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 URB1-AS1Q96HZ7 61 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 METTL26Q96S19 204 aa7.72□□□□□ -1.17
TRAF1-203ENST00000546084 H7C2G1 150 aa7.71□□□□□ -1.17
TRAF1-203ENST00000546084 SH2D1AO60880 128 aa7.71□□□□□ -1.17
TRAF1-203ENST00000546084 IGF2-ASQ6U949 168 aa7.71□□□□□ -1.17
TRAF1-203ENST00000546084 DYNAPQ8N1N2 210 aa7.71□□□□□ -1.17
TRAF1-203ENST00000546084 OR2K2Q8NGT1 345 aa7.71□□□□□ -1.17
TRAF1-203ENST00000546084 TRGV9Q99603 122 aa7.71□□□□□ -1.17
TRAF1-203ENST00000546084 NDUFA3O95167 84 aa7.71□□□□□ -1.18
TRAF1-203ENST00000546084 RNASE4P34096 147 aaKnown RBP7.71□□□□□ -1.18
TRAF1-203ENST00000546084 TEX29Q8N6K0 151 aa7.71□□□□□ -1.18
TRAF1-203ENST00000546084 FOXC2Q99958 501 aa7.71□□□□□ -1.18
TRAF1-203ENST00000546084 PSMB11A5LHX3 300 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 ZFP36P26651 326 aaKnown RBP7.7□□□□□ -1.18
TRAF1-203ENST00000546084 NEGR1Q7Z3B1 354 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 A0A1B0GXF2 115 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 CEACAM4O75871 244 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 C5orf47Q569G3 176 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 SMIM17P0DL12 118 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 LEPP41159 167 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 LYRM7Q5U5X0 104 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 ZNF491Q8N8L2 437 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 ZNF414Q96IQ9 312 aa7.7□□□□□ -1.18
TRAF1-203ENST00000546084 MRPL16Q9NX20 251 aaKnown RBP7.7□□□□□ -1.18
TRAF1-203ENST00000546084 SPENQ96T58 3664 aaKnown RBP7.7□□□□□ -1.18
TRAF1-203ENST00000546084 H3BUX3 64 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 ATP5G2Q06055 141 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 TMEM97Q5BJF2 176 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 IL17RELQ6ZVW7 336 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 DEFB125Q8N687 156 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 PHLDA3Q9Y5J5 127 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 PRAC2D3DTV9 90 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 PRB1P04280 392 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 TRBV19A0A075B6N1 114 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 TNFRSF6BO95407 300 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 LTAP01374 205 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 LOXL1Q08397 574 aaPredicted RBP7.69□□□□□ -1.18
TRAF1-203ENST00000546084 GTSCR1Q86UQ5 136 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 ORMDL3Q8N138 153 aa7.69□□□□□ -1.18
TRAF1-203ENST00000546084 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 FAM231BA6NCW3 169 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 K7EIM0 57 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 HAX1O00165 279 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 CD5LO43866 347 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 TMEM30BQ3MIR4 351 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 CD300EQ496F6 205 aaPredicted RBP7.68□□□□□ -1.18
TRAF1-203ENST00000546084 SCGB1D4Q6XE38 83 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 C1orf43Q9BWL3 253 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 CYSLTR1Q9Y271 337 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 IGHV3-64A0A075B6Q5 118 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 A0A1W2PRX2 142 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 RPL32P62910 135 aaKnown RBP7.68□□□□□ -1.18
TRAF1-203ENST00000546084 PSG3Q16557 428 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 JMJD8Q96S16 334 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 SMAD7O15105 426 aaKnown RBP7.68□□□□□ -1.18
TRAF1-203ENST00000546084 THAP8Q8NA92 274 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 SHANK2-AS3Q9BTD1 123 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 MLST8Q9BVC4 326 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 MS4A6AQ9H2W1 248 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 AGRNO00468 2067 aa7.68□□□□□ -1.18
TRAF1-203ENST00000546084 NEU4Q8WWR8 484 aaPredicted RBP7.67□□□□□ -1.18
TRAF1-203ENST00000546084 SCRT2Q9NQ03 307 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 ZNF256Q9Y2P7 627 aaPredicted RBP7.67□□□□□ -1.18
TRAF1-203ENST00000546084 CFAP46Q8IYW2 2715 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 TEX22C9J3V5 150 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 ZNF688P0C7X2 276 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 GP9P14770 177 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 Q6ZQT7 251 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 C14orf178Q8N769 122 aaPredicted RBP7.67□□□□□ -1.18
TRAF1-203ENST00000546084 CCL19Q99731 98 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 MAP1LC3AQ9H492 121 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 KLF12Q9Y4X4 402 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 DCHS2Q6V1P9 2916 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 CRYGCP07315 174 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 PRTN3P24158 256 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 CT83Q5H943 113 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 PRSS22Q9GZN4 317 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms