RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-223	ENST00000545153	TRAV8-1	A0A0A6YYK1	113 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153		A0A1W2PRE2	83 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	MAP1LC3B2	A6NCE7	125 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	CBY3	A6NI87	242 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	GGTLC3	B5MD39	225 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	TCRA	P04437	139 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	TCTA	P57738	103 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	UBE2G2	P60604	165 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	EIF5A	P63241	154 aa	Known RBP	10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	EIF4E3	Q8N5X7	224 aa	Known RBP	10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	C5orf17	Q8NAS9	161 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	LINC00467	Q9BRT7	94 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	MAP1LC3B	Q9GZQ8	125 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	LENEP	Q9Y5L5	61 aa		10.17	□□□□□ -0.78
PTPN6-223	ENST00000545153	VPS13D	Q5THJ4	4388 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	IGHV1OR15-1	A0A075B7D0	117 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	SNURFL	B1AK76	121 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	RGS13	O14921	159 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	C1QB	P02746	253 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	AKAP14	Q86UN6	197 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	STOML3	Q8TAV4	291 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	FAM213B	Q8TBF2	198 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	TVP23C	Q96ET8	276 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	GSN-AS1	Q9NRJ2	163 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	TP53TG3	Q9ULZ0	132 aa		10.16	□□□□□ -0.78
PTPN6-223	ENST00000545153	SERTM2	A0A1B0GWG4	89 aa		10.15	□□□□□ -0.78
PTPN6-223	ENST00000545153	UMAD1	C9J7I0	102 aa		10.15	□□□□□ -0.78
PTPN6-223	ENST00000545153	IFNA7	P01567	189 aa		10.15	□□□□□ -0.78
PTPN6-223	ENST00000545153	TPT1	P13693	172 aa	Known RBP	10.15	□□□□□ -0.78
PTPN6-223	ENST00000545153	ANXA2R	Q3ZCQ2	193 aa		10.15	□□□□□ -0.78
PTPN6-223	ENST00000545153	SFT2D1	Q8WV19	159 aa		10.15	□□□□□ -0.78
PTPN6-223	ENST00000545153	TREM1	Q9NP99	234 aa		10.15	□□□□□ -0.78
PTPN6-223	ENST00000545153	PSG8	Q9UQ74	426 aa		10.15	□□□□□ -0.78
PTPN6-223	ENST00000545153	GAGE12B	A1L429	117 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	FAM74A7	A6NL05	159 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153		K7EQM0	130 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	GAGE7	O76087	117 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	GAGE12F	P0CL80	117 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	GAGE12G	P0CL81	117 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	GAGE12I	P0CL82	117 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	MUC21	Q5SSG8	566 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	LGALS9C	Q6DKI2	356 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	ZNF680	Q8NEM1	530 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	MBD3L1	Q8WWY6	194 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	LINC00479	Q96M42	142 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153	NDUFAF3	Q9BU61	184 aa		10.14	□□□□□ -0.79
PTPN6-223	ENST00000545153		A0A1B0GV50	99 aa		10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153		A0A1B0GVG6	124 aa		10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153		F6UZH7	168 aa		10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153	DAZ2	Q13117	558 aa	Known RBP	10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153		Q6AWC8	147 aa		10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153	PRNT	Q86SH4	94 aa		10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153	CYB561D1	Q8N8Q1	229 aa		10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153	C11orf72	Q8NBR9	251 aa		10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153	KLF12	Q9Y4X4	402 aa		10.13	□□□□□ -0.79
PTPN6-223	ENST00000545153	TRAV34	A0A0B4J273	112 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153		F5H768	121 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	IGLV2-11	P01706	119 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	ATP5G1	P05496	136 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	ATP5G3	P48201	142 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	FLI1	Q01543	452 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	TMEM88	Q6PEY1	159 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	FAM159A	Q6UWV7	190 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	DPPA3	Q6W0C5	159 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153		Q6ZTI0	123 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	LINC00612	Q8N6U2	182 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	FAM210B	Q96KR6	192 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	ATG101	Q9BSB4	218 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	NDFIP1	Q9BT67	221 aa		10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	NKX6-2	Q9C056	277 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN6-223	ENST00000545153	TRAV21	A0A0B4J279	112 aa		10.11	□□□□□ -0.79
PTPN6-223	ENST00000545153	H2AFB1	P0C5Y9	115 aa		10.11	□□□□□ -0.79
PTPN6-223	ENST00000545153	CST9LP1	Q5W188	147 aa		10.11	□□□□□ -0.79
PTPN6-223	ENST00000545153	TMEM75	Q8N9X5	138 aa		10.11	□□□□□ -0.79
PTPN6-223	ENST00000545153	C8orf49	Q96NF6	230 aa		10.11	□□□□□ -0.79
PTPN6-223	ENST00000545153	NAGK	Q9UJ70	344 aa		10.11	□□□□□ -0.79
PTPN6-223	ENST00000545153	TRGV1	A0A0A0MS02	117 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	FBLL1	A6NHQ2	334 aa	Known RBP	10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	PEX7	O00628	323 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	GNRH2	O43555	120 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	PAGE4	O60829	102 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	ZNF80	P51504	273 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	TCL1A	P56279	114 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	TMEM183B	Q1AE95	376 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	IBA57	Q5T440	356 aa	Known RBP	10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	EIF5AL1	Q6IS14	154 aa	Known RBP	10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	SLC51B	Q86UW2	128 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	TMEM183A	Q8IXX5	376 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	HIST1H2BA	Q96A08	127 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	MDFIC	Q9P1T7	246 aa		10.1	□□□□□ -0.79
PTPN6-223	ENST00000545153	SPINK4	O60575	86 aa		10.09	□□□□□ -0.79
PTPN6-223	ENST00000545153	GCG	P01275	180 aa		10.09	□□□□□ -0.79
PTPN6-223	ENST00000545153	PPT1	P50897	306 aa		10.09	□□□□□ -0.79
PTPN6-223	ENST00000545153	OR5I1	Q13606	314 aa		10.09	□□□□□ -0.79
PTPN6-223	ENST00000545153	ZFP69	Q49AA0	526 aa		10.09	□□□□□ -0.79
PTPN6-223	ENST00000545153	SAPCD1	Q5SSQ6	148 aa		10.09	□□□□□ -0.79
PTPN6-223	ENST00000545153	C9orf62	Q8N4C0	152 aa		10.09	□□□□□ -0.79
PTPN6-223	ENST00000545153	TRGV2	A0A075B6R0	118 aa		10.08	□□□□□ -0.8
PTPN6-223	ENST00000545153	RAB5C	P51148	216 aa		10.08	□□□□□ -0.8
PTPN6-223	ENST00000545153	CCL20	P78556	96 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms