RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 FAM210BQ96KR6 192 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 PYGO2Q9BRQ0 406 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 NDUFAF3Q9BU61 184 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 AGPAT4-IT1Q9H0P7 198 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 Q9H3A6 140 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 APLNQ9ULZ1 77 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 TNFSF18Q9UNG2 199 aa5.25□□□□□ -1.57
CPSF7-224ENST00000544990 TIMM8BQ9Y5J9 83 aaPredicted RBP5.25□□□□□ -1.57
CPSF7-224ENST00000544990 IGKV2-40A0A087WW87 121 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-224ENST00000544990 TRAV12-3A0A0B4J271 114 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 C7orf71A4D174 169 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 RBAKDNA6NC62 111 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 RNF222A6NCQ9 220 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 PGPA6NDG6 321 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 TAAR5O14804 337 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 IGKV2D-40P01614 121 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-224ENST00000544990 PRM2P04554 102 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 GPX1P07203 203 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 NMBP08949 121 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 AZU1P20160 251 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 TMEM88Q6PEY1 159 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 ZNF492Q9P255 531 aa5.24□□□□□ -1.57
CPSF7-224ENST00000544990 TRBV7-9A0A0J9YWB2 115 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 SNURFLB1AK76 121 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 KLLNB2CW77 178 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 HMGB3O15347 200 aaKnown RBP5.23□□□□□ -1.57
CPSF7-224ENST00000544990 ARPC5O15511 151 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 STAG3L2P0CL84 134 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 STAG3L3P0CL85 134 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 DEFB130BP0DP73 79 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 DEFB130AP0DP74 79 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 HTN3P15516 51 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 CRISP2P16562 243 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 RNASE4P34096 147 aaKnown RBP5.23□□□□□ -1.57
CPSF7-224ENST00000544990 ZNF138P52744 262 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 RPL7L1Q6DKI1 246 aaKnown RBP5.23□□□□□ -1.57
CPSF7-224ENST00000544990 ARL6IP6Q8N6S5 226 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 RNASE8Q8TDE3 154 aaKnown RBP5.23□□□□□ -1.57
CPSF7-224ENST00000544990 FAM19A4Q96LR4 140 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 HYLS1Q96M11 299 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 VGLL1Q99990 258 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 ACTR3CQ9C0K3 210 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-224ENST00000544990 OTORQ9NRC9 128 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 LENEPQ9Y5L5 61 aa5.23□□□□□ -1.57
CPSF7-224ENST00000544990 PLAC8L1A1L4L8 177 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 CBY3A6NI87 242 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 ZNF324O75467 553 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-224ENST00000544990 EIF3GO75821 320 aaKnown RBP eCLIP5.22□□□□□ -1.57
CPSF7-224ENST00000544990 CXorf1O96002 111 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 ATP5G1P05496 136 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 ARL14EPLP0DKL9 152 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 P0DMU3 169 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 FAM231AP0DMU4 169 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 FAM231CP0DMU5 169 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 ATP5G3P48201 142 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 CD300CQ08708 224 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 BTN1A1Q13410 526 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 EIF4E3Q8N5X7 224 aaKnown RBP5.22□□□□□ -1.57
CPSF7-224ENST00000544990 ZNF680Q8NEM1 530 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 TMED6Q8WW62 240 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 LINC00467Q9BRT7 94 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 SH3BGRL3Q9H299 93 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 NOP10Q9NPE3 64 aaKnown RBP5.22□□□□□ -1.57
CPSF7-224ENST00000544990 TMEM167BQ9NRX6 74 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 RPH3ALQ9UNE2 315 aa5.22□□□□□ -1.57
CPSF7-224ENST00000544990 LYSTQ99698 3801 aa5.21□□□□□ -1.57
CPSF7-224ENST00000544990 SERTM2A0A1B0GWG4 89 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 F5H768 121 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 G3V3Q6 166 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 K7EQM0 130 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 GCHFRP30047 84 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 ZNF345Q14585 488 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 ANXA2RQ3ZCQ2 193 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 AKR1C8PQ5T2L2 129 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 IQCF2Q8IXL9 164 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 ZFAND2AQ8N6M9 145 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 C15orf53Q8NAA6 179 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 ST6GAL2Q96JF0 529 aa5.21□□□□□ -1.58
CPSF7-224ENST00000544990 IGHV1OR15-1A0A075B7D0 117 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 A0A0D9SG52 128 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 CTXND1A0A1B0GTU2 59 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 HMSDA8MTL9 139 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 SMLR1H3BR10 107 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 FAM3BP58499 235 aaPredicted RBP5.2□□□□□ -1.58
CPSF7-224ENST00000544990 DAZ2Q13117 558 aaKnown RBP5.2□□□□□ -1.58
CPSF7-224ENST00000544990 FAM159AQ6UWV7 190 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 GOLT1AQ6ZVE7 132 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 UBE2DNLQ8IWF7 75 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 KCNRGQ8N5I3 272 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 C5orf17Q8NAS9 161 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 Q8TAT8 98 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 SUN5Q8TC36 379 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 NDFIP1Q9BT67 221 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
CPSF7-224ENST00000544990 KANTRA0A1W2PQU2 76 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 A0A1W2PRE2 83 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 FBLL1A6NHQ2 334 aaKnown RBP5.19□□□□□ -1.58
CPSF7-224ENST00000544990 GAGE7O76087 117 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 GAGE12FP0CL80 117 aa5.19□□□□□ -1.58
CPSF7-224ENST00000544990 GAGE12GP0CL81 117 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms