RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 ZNF680Q8NEM1 530 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 TVP23CQ96ET8 276 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 ST6GAL2Q96JF0 529 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 HYLS1Q96M11 299 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 C18orf15Q96N68 181 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 ACTR3CQ9C0K3 210 aaPredicted RBP8.02□□□□□ -1.13
YBX3-216ENST00000544622 GSN-AS1Q9NRJ2 163 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 IGHV1OR15-1A0A075B7D0 117 aa8.01□□□□□ -1.13
YBX3-216ENST00000544622 CXorf1O96002 111 aa8.01□□□□□ -1.13
YBX3-216ENST00000544622 HTN3P15516 51 aa8.01□□□□□ -1.13
YBX3-216ENST00000544622 KCNRGQ8N5I3 272 aa8.01□□□□□ -1.13
YBX3-216ENST00000544622 TP53TG3Q9ULZ0 132 aa8.01□□□□□ -1.13
YBX3-216ENST00000544622 HECTD4Q9Y4D8 3996 aa8.01□□□□□ -1.13
YBX3-216ENST00000544622 SNURFLB1AK76 121 aa8□□□□□ -1.13
YBX3-216ENST00000544622 IGLV2-11P01706 119 aa8□□□□□ -1.13
YBX3-216ENST00000544622 TCRAP04437 139 aa8□□□□□ -1.13
YBX3-216ENST00000544622 TCL1AP56279 114 aa8□□□□□ -1.13
YBX3-216ENST00000544622 GNG5P63218 68 aa8□□□□□ -1.13
YBX3-216ENST00000544622 TDRG1Q3Y452 100 aa8□□□□□ -1.13
YBX3-216ENST00000544622 RNF212Q495C1 297 aa8□□□□□ -1.13
YBX3-216ENST00000544622 Q6ZTI0 123 aa8□□□□□ -1.13
YBX3-216ENST00000544622 GOLT1AQ6ZVE7 132 aa8□□□□□ -1.13
YBX3-216ENST00000544622 C15orf53Q8NAA6 179 aa8□□□□□ -1.13
YBX3-216ENST00000544622 CMTM2Q8TAZ6 248 aa8□□□□□ -1.13
YBX3-216ENST00000544622 TMEM167BQ9NRX6 74 aa8□□□□□ -1.13
YBX3-216ENST00000544622 KLF12Q9Y4X4 402 aa8□□□□□ -1.13
YBX3-216ENST00000544622 TRAV8-1A0A0A6YYK1 113 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 CTXND1A0A1B0GTU2 59 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 SERTM2A0A1B0GWG4 89 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 A0A1W2PRE2 83 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 GGTLC3B5MD39 225 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 F5H768 121 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 SPINK4O60575 86 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 HOXA5P20719 270 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 SUMO1P63165 101 aaKnown RBP7.99□□□□□ -1.13
YBX3-216ENST00000544622 C5orf17Q8NAS9 161 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 EPDR1Q9UM22 224 aa7.99□□□□□ -1.13
YBX3-216ENST00000544622 PKD1P98161 4303 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 RGS13O14921 159 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 GAGE7O76087 117 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 GAGE12FP0CL80 117 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 GAGE12GP0CL81 117 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 GAGE12IP0CL82 117 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 LGALS9BQ3B8N2 356 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 ARPC5LQ9BPX5 153 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
YBX3-216ENST00000544622 A0A0D9SG52 128 aa7.97□□□□□ -1.13
YBX3-216ENST00000544622 H3BNG1 76 aa7.97□□□□□ -1.13
YBX3-216ENST00000544622 SEC11BP0C7V7 166 aa7.97□□□□□ -1.13
YBX3-216ENST00000544622 AKR1C8PQ5T2L2 129 aa7.97□□□□□ -1.13
YBX3-216ENST00000544622 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
YBX3-216ENST00000544622 RPH3ALQ9UNE2 315 aa7.97□□□□□ -1.13
YBX3-216ENST00000544622 FAM74A7A6NL05 159 aa7.96□□□□□ -1.14
YBX3-216ENST00000544622 FHITP49789 147 aa7.96□□□□□ -1.14
YBX3-216ENST00000544622 MUC21Q5SSG8 566 aa7.96□□□□□ -1.14
YBX3-216ENST00000544622 Q6ZNX1 250 aa7.96□□□□□ -1.14
YBX3-216ENST00000544622 RASL10AQ92737 203 aa7.96□□□□□ -1.14
YBX3-216ENST00000544622 SGK494Q96LW2 274 aa7.96□□□□□ -1.14
YBX3-216ENST00000544622 TREM1Q9NP99 234 aa7.96□□□□□ -1.14
YBX3-216ENST00000544622 PSG8Q9UQ74 426 aa7.96□□□□□ -1.14
YBX3-216ENST00000544622 TRAV26-1A0A087WT03 109 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 TRGV1A0A0A0MS02 117 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 TRAV21A0A0B4J279 112 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 FBLL1A6NHQ2 334 aaKnown RBP7.95□□□□□ -1.14
YBX3-216ENST00000544622 BCL2L11O43521 198 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 ZNF80P51504 273 aaPredicted RBP7.95□□□□□ -1.14
YBX3-216ENST00000544622 FGF8P55075 233 aaPredicted RBP7.95□□□□□ -1.14
YBX3-216ENST00000544622 FAM3BP58499 235 aaPredicted RBP7.95□□□□□ -1.14
YBX3-216ENST00000544622 OR5I1Q13606 314 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 FAM159AQ6UWV7 190 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 Q6ZR54 194 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 CYB561D1Q8N8Q1 229 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 TMEM75Q8N9X5 138 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 MBD3L1Q8WWY6 194 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 VSIG2Q96IQ7 327 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 LINC00479Q96M42 142 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 ATG101Q9BSB4 218 aa7.95□□□□□ -1.14
YBX3-216ENST00000544622 NKX6-2Q9C056 277 aaPredicted RBP7.95□□□□□ -1.14
YBX3-216ENST00000544622 TRGV2A0A075B6R0 118 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 MAP1LC3B2A6NCE7 125 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 UMAD1C9J7I0 102 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 F6UZH7 168 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 GNRH2O43555 120 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 NUDT3O95989 172 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 FLI1Q01543 452 aaPredicted RBP7.94□□□□□ -1.14
YBX3-216ENST00000544622 ZNF415Q09FC8 603 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 TCTE3Q8IZS6 198 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 MAP1LC3BQ9GZQ8 125 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 C11orf21Q9P2W6 132 aa7.94□□□□□ -1.14
YBX3-216ENST00000544622 NACAE9PAV3 2078 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 DNAH11Q96DT5 4516 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 MUC4Q99102 2169 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 TRGV11A0A075B6L2 103 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 IGHV3-16A0A0C4DH30 117 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 A0A0J9YY99 117 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 KANTRA0A1W2PQU2 76 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 K7EQM0 130 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 TYMSP04818 313 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms