RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PTPN13Q12923 2485 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 DAD1P61803 113 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 KIR3DS1Q14943 382 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 FREM1Q5H8C1 2179 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 MYMXA0A1B0GTQ4 84 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 A0A1W2PNU3 283 aaPredicted RBP10.13□□□□□ -0.79
CHD4-211ENST00000544484 SDHAF1A6NFY7 115 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 CHAC1Q9BUX1 264 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 IGFL2Q6UWQ7 119 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 ZNRF2Q8NHG8 242 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 EML6Q6ZMW3 1958 aa10.13□□□□□ -0.79
CHD4-211ENST00000544484 IGLC7A0M8Q6 106 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 J3QLI3 93 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 TNCP24821 2201 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 IGHV4-61A0A0C4DH41 118 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 FAM231BA6NCW3 169 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 CT83Q5H943 113 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 TMEM14CQ9P0S9 112 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 DEFB136Q30KP8 78 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 NRGNQ92686 78 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 WISP2O76076 250 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 MTURNQ8N3F0 131 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 THAP8Q8NA92 274 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
CHD4-211ENST00000544484 IGHV7-4-1A0A0J9YVY3 117 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 RHODO00212 210 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 Q8NFD4 153 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 A0A096LPF7 62 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 VWC2LB2RUY7 222 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 A8MWP6 167 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 INS-IGF2F8WCM5 200 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 PRR20EP86478 221 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 PRR20CP86479 221 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 PRR20DP86480 221 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 PRR20BP86481 221 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 PRR20AP86496 221 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 POU2AF1Q16633 256 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 POLR3KQ9Y2Y1 108 aaPredicted RBP10.11□□□□□ -0.79
CHD4-211ENST00000544484 TRAV8-3A0A0A6YYJ7 113 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 SPRY2O43597 315 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 RNF138Q8WVD3 245 aa10.11□□□□□ -0.79
CHD4-211ENST00000544484 IL15RAQ13261 267 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 LEPROTO15243 131 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 Q8N8P6 123 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 IGHV4-30-2A0A087WSY4 118 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 RITA1Q96K30 269 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 I3L3M4 83 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 IGHV4-38-2P0DP08 117 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 LHBP01229 141 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 GAGE6Q13070 117 aa10.1□□□□□ -0.79
CHD4-211ENST00000544484 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
CHD4-211ENST00000544484 NPYP01303 97 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 PFN2P35080 140 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 FAM231DQ6ZW35 169 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 TRBV25-1A0A075B6N4 114 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 SMIM27A0A1W2PRY6 76 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 NACAE9PAV3 2078 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 ELANEP08246 267 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 DYNAPQ8N1N2 210 aa10.09□□□□□ -0.79
CHD4-211ENST00000544484 SIGLEC8Q9NYZ4 499 aa10.08□□□□□ -0.8
CHD4-211ENST00000544484 IGHV1-24A0A0C4DH33 117 aa10.08□□□□□ -0.8
CHD4-211ENST00000544484 CENPVL3A0A0U1RRI6 287 aa10.08□□□□□ -0.8
CHD4-211ENST00000544484 DLEU1O43261 78 aa10.08□□□□□ -0.8
CHD4-211ENST00000544484 BLCAPP62952 87 aa10.08□□□□□ -0.8
CHD4-211ENST00000544484 GNRH2O43555 120 aa10.08□□□□□ -0.8
CHD4-211ENST00000544484 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
CHD4-211ENST00000544484 VPREB3Q9UKI3 123 aa10.08□□□□□ -0.8
CHD4-211ENST00000544484 EREGO14944 169 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 FOXE3Q13461 319 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
CHD4-211ENST00000544484 K7EN84 100 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 SIGMAR1Q99720 223 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 HOXD3P31249 432 aaPredicted RBP10.07□□□□□ -0.8
CHD4-211ENST00000544484 PMVKQ15126 192 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 Q6ZWC4 215 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 SEM1Q6ZVN7 128 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 NDUFS6O75380 124 aaKnown RBP10.07□□□□□ -0.8
CHD4-211ENST00000544484 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 PLXNB3Q9ULL4 1909 aa10.07□□□□□ -0.8
CHD4-211ENST00000544484 HLA-DRB4P13762 266 aa10.06□□□□□ -0.8
CHD4-211ENST00000544484 ADORA2A-AS1P86434 159 aa10.06□□□□□ -0.8
CHD4-211ENST00000544484 C11orf52Q96A22 123 aa10.06□□□□□ -0.8
CHD4-211ENST00000544484 HLA-DRB4X5D2U9 266 aa10.06□□□□□ -0.8
CHD4-211ENST00000544484 OR11H6Q8NGC7 330 aa10.06□□□□□ -0.8
CHD4-211ENST00000544484 NXPH4O95158 308 aa10.06□□□□□ -0.8
CHD4-211ENST00000544484 HIST1H4AP62805 103 aaKnown RBP10.06□□□□□ -0.8
CHD4-211ENST00000544484 OCIAD2Q56VL3 154 aa10.06□□□□□ -0.8
CHD4-211ENST00000544484 C9JAW5 83 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 IGHV7-81A0A0B4J1V7 117 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
CHD4-211ENST00000544484 ADAMTS9Q9P2N4 1935 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 VWC2Q2TAL6 325 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 CLPSL2Q6UWE3 100 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 C8orf31Q8N9H6 132 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 EGR2P11161 476 aaPredicted RBP10.05□□□□□ -0.8
CHD4-211ENST00000544484 KRTAP27-1Q3LI81 207 aa10.05□□□□□ -0.8
CHD4-211ENST00000544484 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms