RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CCDC140Q96MF4 163 aa12.22□□□□□ -0.45
SNRNP70-203ENST00000544278 A1L4Q6 167 aa12.21□□□□□ -0.45
SNRNP70-203ENST00000544278 TMEM189A5PLL7 270 aa12.21□□□□□ -0.45
SNRNP70-203ENST00000544278 C2orf70A6NJV1 201 aa12.21□□□□□ -0.45
SNRNP70-203ENST00000544278 NPFFO15130 113 aa12.21□□□□□ -0.45
SNRNP70-203ENST00000544278 WIPF2Q8TF74 440 aaPredicted RBP12.21□□□□□ -0.45
SNRNP70-203ENST00000544278 THYN1Q9P016 225 aa12.21□□□□□ -0.45
SNRNP70-203ENST00000544278 D6R8Y8 96 aa12.21□□□□□ -0.46
SNRNP70-203ENST00000544278 H3BUT2 72 aa12.21□□□□□ -0.46
SNRNP70-203ENST00000544278 OVOL3O00110 214 aa12.21□□□□□ -0.46
SNRNP70-203ENST00000544278 IGF1P05019 195 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 GATA1P15976 413 aaPredicted RBP12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 RPL11P62913 178 aaKnown RBP12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 IL17RELQ6ZVW7 336 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 LEPROTL1O95214 131 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 EDN2P20800 178 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 BLCAPP62952 87 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 TMEM70Q9BUB7 260 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.463e-6■□□□□ 11.1
SNRNP70-203ENST00000544278 AGRNO00468 2067 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 EVI2AP22794 236 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 DEFB125Q8N687 156 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 OR8A1Q8NGG7 326 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 GLMPQ8WWB7 406 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 ZNF492Q9P255 531 aa12.2□□□□□ -0.46
SNRNP70-203ENST00000544278 IGHV4-30-2A0A087WSY4 118 aa12.19□□□□□ -0.46
SNRNP70-203ENST00000544278 UBE2E1P51965 193 aa12.19□□□□□ -0.46
SNRNP70-203ENST00000544278 TWIST1Q15672 202 aa12.19□□□□□ -0.46
SNRNP70-203ENST00000544278 COX19Q49B96 90 aa12.19□□□□□ -0.46
SNRNP70-203ENST00000544278 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
SNRNP70-203ENST00000544278 C2CD3Q4AC94 2353 aa12.19□□□□□ -0.46
SNRNP70-203ENST00000544278 JMJD1CQ15652 2540 aa12.19□□□□□ -0.46
SNRNP70-203ENST00000544278 PRR25Q96S07 402 aa12.18□□□□□ -0.46
SNRNP70-203ENST00000544278 KLK15Q9H2R5 256 aa12.18□□□□□ -0.46
SNRNP70-203ENST00000544278 NDUFS8O00217 210 aa12.18□□□□□ -0.46
SNRNP70-203ENST00000544278 RPL7P18124 248 aaKnown RBP12.18□□□□□ -0.46
SNRNP70-203ENST00000544278 ATP5J2P56134 94 aa12.18□□□□□ -0.46
SNRNP70-203ENST00000544278 SAMD13Q5VXD3 122 aa12.18□□□□□ -0.46
SNRNP70-203ENST00000544278 NPIPB6E9PJ23 425 aa12.18□□□□□ -0.46
SNRNP70-203ENST00000544278 UNQ9165/PRO28630Q6UXU0 137 aa12.18□□□□□ -0.46
SNRNP70-203ENST00000544278 PRRC2AP48634 2157 aaKnown RBP12.17□□□□□ -0.46
SNRNP70-203ENST00000544278 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
SNRNP70-203ENST00000544278 ZNF502Q8TBZ5 544 aa12.17□□□□□ -0.46
SNRNP70-203ENST00000544278 C18orf15Q96N68 181 aa12.17□□□□□ -0.46
SNRNP70-203ENST00000544278 F6UB75 175 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 H3BUX3 64 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 TRGV3P03979 118 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 MINOS1Q5TGZ0 78 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 MINOS1-NBL1R4GNA1 71 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 AVPP01185 164 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 KIR3DS1Q14943 382 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 KLF5Q13887 457 aaPredicted RBP12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 PEF1Q9UBV8 284 aaKnown RBP12.16□□□□□ -0.46
SNRNP70-203ENST00000544278 CLPSL1A2RUU4 121 aa12.15□□□□□ -0.46
SNRNP70-203ENST00000544278 CCL19Q99731 98 aa12.15□□□□□ -0.46
SNRNP70-203ENST00000544278 PRORYQ9H606 182 aa12.15□□□□□ -0.46
SNRNP70-203ENST00000544278 RIGQ13278 110 aa12.15□□□□□ -0.46
SNRNP70-203ENST00000544278 ZFAND3Q9H8U3 227 aa12.15□□□□□ -0.46
SNRNP70-203ENST00000544278 C11orf21Q9P2W6 132 aa12.15□□□□□ -0.46
SNRNP70-203ENST00000544278 CHD6Q8TD26 2715 aa12.15□□□□□ -0.47
SNRNP70-203ENST00000544278 TRAV26-2A0A0B4J265 109 aa12.15□□□□□ -0.47
SNRNP70-203ENST00000544278 BUB3O43684 328 aa12.15□□□□□ -0.47
SNRNP70-203ENST00000544278 FAM162BQ5T6X4 162 aa12.15□□□□□ -0.47
SNRNP70-203ENST00000544278 SYS1-DBNDD2H3BUS1 97 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 RASL11AQ6T310 242 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 FA2HQ7L5A8 372 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 JMJD8Q96S16 334 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 HAX1O00165 279 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 EBI3Q14213 229 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 PRSS57Q6UWY2 283 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 C5orf56Q8N8D9 126 aa12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 FAM110DQ8TAY7 271 aaPredicted RBP12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 SRSF8Q9BRL6 282 aaKnown RBP12.14□□□□□ -0.47
SNRNP70-203ENST00000544278 SMAD7O15105 426 aaKnown RBP12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 NPYP01303 97 aa12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 PIFOQ8TCI5 191 aa12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 AP5S1Q9NUS5 200 aa12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 ZNF469Q96JG9 3925 aaPredicted RBP12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 AZU1P20160 251 aa12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 CT83Q5H943 113 aa12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 AGPAT4-IT1Q9H0P7 198 aa12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 MRPL51Q4U2R6 128 aaKnown RBP12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 PRELID3AQ96N28 172 aa12.13□□□□□ -0.47
SNRNP70-203ENST00000544278 NBPF19A0A087WUL8 3843 aa12.12□□□□□ -0.47
SNRNP70-203ENST00000544278 TRAV41A0A0B4J266 112 aa12.12□□□□□ -0.47
SNRNP70-203ENST00000544278 G3V4G9 280 aa12.12□□□□□ -0.47
SNRNP70-203ENST00000544278 K7EMI3 77 aa12.12□□□□□ -0.47
SNRNP70-203ENST00000544278 CD5LO43866 347 aa12.12□□□□□ -0.47
SNRNP70-203ENST00000544278 CKS2P33552 79 aa12.12□□□□□ -0.47
SNRNP70-203ENST00000544278 SIGLEC8Q9NYZ4 499 aa12.12□□□□□ -0.47
SNRNP70-203ENST00000544278 UFC1Q9Y3C8 167 aa12.12□□□□□ -0.47
SNRNP70-203ENST00000544278 ZNF575Q86XF7 245 aa12.11□□□□□ -0.47
SNRNP70-203ENST00000544278 MTURNQ8N3F0 131 aa12.11□□□□□ -0.47
SNRNP70-203ENST00000544278 GFRA4Q9GZZ7 299 aa12.11□□□□□ -0.47
SNRNP70-203ENST00000544278 ATP5G2Q06055 141 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms