RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 C10orf113Q5VZT2 155 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 OR8I2Q8N0Y5 310 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 PFDN5Q99471 154 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 SLC25A39Q9BZJ4 359 aaPredicted RBP3.78□□□□□ -1.8
CLIP1-217ENST00000543205 SLC25A22Q9H936 323 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 WFDC1Q9HC57 220 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 SLC39A9Q9NUM3 307 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 KLF12Q9Y4X4 402 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 PXMP4Q9Y6I8 212 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 BORCS7-ASMTA0A0B4J1R7 106 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 ZNF98A6NK75 572 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 G3V3Q6 166 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 GALR1P47211 349 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 CMC4P56277 68 aaPredicted RBP3.78□□□□□ -1.8
CLIP1-217ENST00000543205 LINC00305Q7Z4B0 112 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 TCTE3Q8IZS6 198 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.78□□□□□ -1.8
CLIP1-217ENST00000543205 ST6GAL2Q96JF0 529 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 GPR82Q96P67 336 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 SHANK2-AS3Q9BTD1 123 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 TMEM208Q9BTX3 173 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 ARV1Q9H2C2 271 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 MS4A6AQ9H2W1 248 aa3.78□□□□□ -1.8
CLIP1-217ENST00000543205 TGIF2-C20orf24A0A0A6YYL0 155 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 TRAV2A0A0B4J234 112 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 A0A0D9SG52 128 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 A0A1B0GVG6 124 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 HMSDA8MTL9 139 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 H3BRN7 92 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 K7EIL1 84 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 TAAR5O14804 337 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 MRPS12O15235 138 aaKnown RBP3.77□□□□□ -1.81
CLIP1-217ENST00000543205 RBMY1CP0DJD4 496 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 AMTP48728 403 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 TAS2R60P59551 318 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 ZNF726P1Q15940 193 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 LEMD1Q68G75 181 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 PATE2Q6UY27 113 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 RARRES2Q99969 163 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 SCRT1Q9BWW7 348 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 TUBA4BQ9H853 241 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 SMAD5-AS1Q9Y6J3 95 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 KANTRA0A1W2PQU2 76 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 OR11H12B2RN74 326 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 CD7P09564 240 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 RPL7P18124 248 aaKnown RBP3.77□□□□□ -1.81
CLIP1-217ENST00000543205 CRYBA4P53673 196 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 FGF8P55075 233 aaPredicted RBP3.77□□□□□ -1.81
CLIP1-217ENST00000543205 ZNF345Q14585 488 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 C4orf26Q17RF5 130 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 ACOT6Q3I5F7 207 aaPredicted RBP3.77□□□□□ -1.81
CLIP1-217ENST00000543205 RPL7L1Q6DKI1 246 aaKnown RBP3.77□□□□□ -1.81
CLIP1-217ENST00000543205 MRPL52Q86TS9 123 aaKnown RBP3.77□□□□□ -1.81
CLIP1-217ENST00000543205 OR2D3Q8NGH3 330 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 TIMM9Q9Y5J7 89 aa3.77□□□□□ -1.81
CLIP1-217ENST00000543205 SMKR1H3BMG3 65 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 K7EQG2 157 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 PFDN1O60925 122 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 C1QBP02746 253 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 MEOX2P50222 304 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 SNRPD3P62318 126 aaKnown RBP3.76□□□□□ -1.81
CLIP1-217ENST00000543205 FAM78BQ5VT40 261 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 SAMD13Q5VXD3 122 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 BPIFA4PQ86YQ2 179 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 MTURNQ8N3F0 131 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 KCNRGQ8N5I3 272 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 DEFB125Q8N687 156 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 DCANP1Q8TF63 244 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 GNPNAT1Q96EK6 184 aaPredicted RBP3.76□□□□□ -1.81
CLIP1-217ENST00000543205 HYLS1Q96M11 299 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 C20orf144Q9BQM9 153 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 CMYA5Q8N3K9 4069 aa3.76□□□□□ -1.81
CLIP1-217ENST00000543205 TRAV5A0A0B4J249 113 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 BCL2L11O43521 198 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 ZNF688P0C7X2 276 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 CXCL2P19875 107 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 ATP6V0CP27449 155 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 DEFB131AP59861 70 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 RHOBP62745 196 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 SERF2P84101 59 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 CD164Q04900 197 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 ZFP69Q49AA0 526 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 Q6ZVH6 145 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 TMUB2Q71RG4 321 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 OR10G4Q8NGN3 311 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 OR10G9Q8NGN4 311 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 OR10G7Q8NGN6 311 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 OR2G3Q8NGZ4 309 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 LINC00052Q96N35 136 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 PSMG3Q9BT73 122 aaPredicted RBP3.75□□□□□ -1.81
CLIP1-217ENST00000543205 MRPL32Q9BYC8 188 aaKnown RBP3.75□□□□□ -1.81
CLIP1-217ENST00000543205 WFDC10AQ9H1F0 79 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 PPDPFQ9H3Y8 114 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 FUT9Q9Y231 359 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 RFNGQ9Y644 331 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 IGLV5-52A0A0A0MRZ9 124 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 EIF3GO75821 320 aaKnown RBP eCLIP3.75□□□□□ -1.81
CLIP1-217ENST00000543205 HIST1H1EP10412 219 aaKnown RBP3.75□□□□□ -1.81
CLIP1-217ENST00000543205 PSMB3P49720 205 aa3.75□□□□□ -1.81
CLIP1-217ENST00000543205 TAS2R45P59539 299 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms