RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 FOXG1P55316 489 aaPredicted RBP8.8□□□□□ -1
ERBB2-204ENST00000541774 GFRALQ6UXV0 394 aa8.8□□□□□ -1
ERBB2-204ENST00000541774 DNAJC30Q96LL9 226 aa8.8□□□□□ -1
ERBB2-204ENST00000541774 PPDPFQ9H3Y8 114 aa8.8□□□□□ -1
ERBB2-204ENST00000541774 TRAV41A0A0B4J266 112 aa8.8□□□□□ -1
ERBB2-204ENST00000541774 TMEM30BQ3MIR4 351 aa8.8□□□□□ -1
ERBB2-204ENST00000541774 TRPT1Q86TN4 253 aaKnown RBP8.8□□□□□ -1
ERBB2-204ENST00000541774 KLHL30-AS1Q8NEE0 82 aa8.8□□□□□ -1
ERBB2-204ENST00000541774 FAM216BQ8N7L0 139 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 TMEM14BQ9NUH8 114 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 TNFRSF18Q9Y5U5 241 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 ACYP1P07311 99 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 IMMP1LQ96LU5 166 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 VPREB3Q9UKI3 123 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 PTPRSQ13332 1948 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 PLXNB3Q9ULL4 1909 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 PVRIGQ6DKI7 326 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 FREM1Q5H8C1 2179 aa8.79□□□□□ -1
ERBB2-204ENST00000541774 IGLV3-32A0A0A0MS00 114 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 A0A1B0GXF2 115 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 C14orf178Q8N769 122 aaPredicted RBP8.78□□□□□ -1
ERBB2-204ENST00000541774 PLXNA2O75051 1894 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 COL6A3P12111 3177 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 TRAV26-2A0A0B4J265 109 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 ZNF493Q6ZR52 646 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 V9GYY9 64 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 NCOA6Q14686 2063 aaPredicted RBP8.78□□□□□ -1
ERBB2-204ENST00000541774 IQCF6A8MYZ5 107 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 NTN3O00634 580 aaPredicted RBP8.78□□□□□ -1
ERBB2-204ENST00000541774 NDUFA7O95182 113 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 IGKV1-16P04430 117 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 S100A7L2Q5SY68 101 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 IGFL4Q6B9Z1 124 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 C1orf162Q8NEQ5 155 aaPredicted RBP8.78□□□□□ -1
ERBB2-204ENST00000541774 PEMTQ9UBM1 199 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 LY6G6EA0A0G2JKS1 128 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 A4D1N5 150 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 CNTFRP26992 372 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 LYPD1Q8N2G4 141 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 BRK1Q8WUW1 75 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 C21orf62Q9NYP8 219 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 U3KQA8 63 aa8.78□□□□□ -1
ERBB2-204ENST00000541774 IGKV2D-26A0A0A0MRZ7 120 aa8.77□□□□□ -1
ERBB2-204ENST00000541774 J3QQQ9 107 aa8.77□□□□□ -1
ERBB2-204ENST00000541774 IGLV2-8P01709 118 aa8.77□□□□□ -1
ERBB2-204ENST00000541774 GATA1P15976 413 aaPredicted RBP8.77□□□□□ -1
ERBB2-204ENST00000541774 ZNF503Q96F45 646 aa8.77□□□□□ -1
ERBB2-204ENST00000541774 NUP210Q8TEM1 1887 aaPredicted RBP8.77□□□□□ -1.01
ERBB2-204ENST00000541774 FOXL2NBQ6ZUU3 175 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 DTX2Q86UW9 622 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 C3orf22Q8N5N4 141 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 TMEM75Q8N9X5 138 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 WDFY4Q6ZS81 3184 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 TNCP24821 2201 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 CD28P10747 220 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 CFAP126Q5VTH2 177 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 ZNF474Q6S9Z5 364 aaPredicted RBP8.77□□□□□ -1.01
ERBB2-204ENST00000541774 MOB4Q9Y3A3 225 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 CSPG4Q6UVK1 2322 aa8.77□□□□□ -1.01
ERBB2-204ENST00000541774 ZFYVE26Q68DK2 2539 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 IGLV3-12A0A075B6K2 115 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 PINLYPA6NC86 204 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 RBMY1BA6NDE4 496 aaKnown RBP8.76□□□□□ -1.01
ERBB2-204ENST00000541774 RBMY1EA6NEQ0 496 aaKnown RBP8.76□□□□□ -1.01
ERBB2-204ENST00000541774 NDUFC2O95298 119 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 RBMY1DP0C7P1 496 aaKnown RBP8.76□□□□□ -1.01
ERBB2-204ENST00000541774 RBMY1A1P0DJD3 496 aaKnown RBP8.76□□□□□ -1.01
ERBB2-204ENST00000541774 RBMY1CP0DJD4 496 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 RBMY1FQ15415 496 aaKnown RBP8.76□□□□□ -1.01
ERBB2-204ENST00000541774 TMEM190Q8WZ59 177 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 A0A0U1RQV1 116 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 TEX49A0A1B0GTD5 131 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 CCL3L1P16619 93 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 COLCA1Q6ZS62 124 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 ADAMTS9Q9P2N4 1935 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 ZCCHC24Q8N2G6 241 aaKnown RBP8.76□□□□□ -1.01
ERBB2-204ENST00000541774 SPEGQ15772 3267 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 DPH3P1Q9H4G8 78 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 TP53TG1Q9Y2A0 90 aa8.76□□□□□ -1.01
ERBB2-204ENST00000541774 TRBV10-2A0A0K0K1G8 114 aa8.75□□□□□ -1.01
ERBB2-204ENST00000541774 TIMM21Q9BVV7 248 aa8.75□□□□□ -1.01
ERBB2-204ENST00000541774 CSDC2Q9Y534 153 aaKnown RBP8.75□□□□□ -1.01
ERBB2-204ENST00000541774 CENPVL3A0A0U1RRI6 287 aa8.75□□□□□ -1.01
ERBB2-204ENST00000541774 SS18L1O75177 396 aaPredicted RBP8.75□□□□□ -1.01
ERBB2-204ENST00000541774 DUSP14O95147 198 aaKnown RBP8.75□□□□□ -1.01
ERBB2-204ENST00000541774 SLC50A1Q9BRV3 221 aa8.75□□□□□ -1.01
ERBB2-204ENST00000541774 TM4SF5O14894 197 aa8.75□□□□□ -1.01
ERBB2-204ENST00000541774 SMIM2Q9BVW6 85 aa8.75□□□□□ -1.01
ERBB2-204ENST00000541774 PRO3102Q9H379 93 aa8.75□□□□□ -1.01
ERBB2-204ENST00000541774 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
ERBB2-204ENST00000541774 hADV29S1A0JD25 119 aa8.74□□□□□ -1.01
ERBB2-204ENST00000541774 RNASE4P34096 147 aaKnown RBP8.74□□□□□ -1.01
ERBB2-204ENST00000541774 Q0VFX4 171 aa8.74□□□□□ -1.01
ERBB2-204ENST00000541774 HRCT1Q6UXD1 115 aa8.74□□□□□ -1.01
ERBB2-204ENST00000541774 ASCL5Q7RTU5 278 aa8.74□□□□□ -1.01
ERBB2-204ENST00000541774 IGKV3D-7A0A0C4DH55 119 aa8.74□□□□□ -1.01
ERBB2-204ENST00000541774 VCYO14598 125 aa8.74□□□□□ -1.01
ERBB2-204ENST00000541774 IGLC6P0CF74 106 aa8.74□□□□□ -1.01
ERBB2-204ENST00000541774 SRD5A1P18405 259 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms