RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 IBA57Q5T440 356 aaKnown RBP9.25□□□□□ -0.93
LTBR-208ENST00000541005 Q6ZNX1 250 aa9.25□□□□□ -0.93
LTBR-208ENST00000541005 KMT2AQ03164 3969 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 IGHV1OR15-1A0A075B7D0 117 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 RGS13O14921 159 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 TCRAP04437 139 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 ATP5G1P05496 136 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 SEC11BP0C7V7 166 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 HTN3P15516 51 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 ATP5G3P48201 142 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 TCL1AP56279 114 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 GNG5P63218 68 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 TCTE3Q8IZS6 198 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 C18orf15Q96N68 181 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 RPH3ALQ9UNE2 315 aa9.24□□□□□ -0.93
LTBR-208ENST00000541005 TRAV8-1A0A0A6YYK1 113 aa9.23□□□□□ -0.93
LTBR-208ENST00000541005 KANTRA0A1W2PQU2 76 aa9.23□□□□□ -0.93
LTBR-208ENST00000541005 TMEM88Q6PEY1 159 aa9.23□□□□□ -0.93
LTBR-208ENST00000541005 Q6ZQT7 251 aa9.23□□□□□ -0.93
LTBR-208ENST00000541005 TVP23CQ96ET8 276 aa9.23□□□□□ -0.93
LTBR-208ENST00000541005 GSN-AS1Q9NRJ2 163 aa9.23□□□□□ -0.93
LTBR-208ENST00000541005 VPS13DQ5THJ4 4388 aa9.23□□□□□ -0.93
LTBR-208ENST00000541005 MAP1LC3B2A6NCE7 125 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 FBLL1A6NHQ2 334 aaKnown RBP9.22□□□□□ -0.93
LTBR-208ENST00000541005 UMAD1C9J7I0 102 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 IGLV2-11P01706 119 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 P0DMU3 169 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 FAM231AP0DMU4 169 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 FAM231CP0DMU5 169 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 SUMO1P63165 101 aaKnown RBP9.22□□□□□ -0.93
LTBR-208ENST00000541005 EIF5AP63241 154 aaKnown RBP9.22□□□□□ -0.93
LTBR-208ENST00000541005 TDRG1Q3Y452 100 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 CYB561D1Q8N8Q1 229 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 C15orf53Q8NAA6 179 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 ATG101Q9BSB4 218 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 ZNF471Q9BX82 626 aaPredicted RBP9.22□□□□□ -0.93
LTBR-208ENST00000541005 NKX6-2Q9C056 277 aaPredicted RBP9.22□□□□□ -0.93
LTBR-208ENST00000541005 MAP1LC3BQ9GZQ8 125 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 EPDR1Q9UM22 224 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 DNAH6Q9C0G6 4158 aa9.22□□□□□ -0.93
LTBR-208ENST00000541005 HYDINQ4G0P3 5121 aa9.21□□□□□ -0.93
LTBR-208ENST00000541005 F5H768 121 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 K7EQM0 130 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 SPINK4O60575 86 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 FGF8P55075 233 aaPredicted RBP9.21□□□□□ -0.94
LTBR-208ENST00000541005 DPPA3Q6W0C5 159 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 Q6ZTI0 123 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 TMUB2Q71RG4 321 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 IQCF2Q8IXL9 164 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 STOML3Q8TAV4 291 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 TMPRSS5Q9H3S3 457 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 TREM1Q9NP99 234 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 TP53TG3Q9ULZ0 132 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 KLF12Q9Y4X4 402 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 ARL2-SNX15V9GYD0 113 aa9.21□□□□□ -0.94
LTBR-208ENST00000541005 FAM74A7A6NL05 159 aa9.2□□□□□ -0.94
LTBR-208ENST00000541005 ZNF415Q09FC8 603 aa9.2□□□□□ -0.94
LTBR-208ENST00000541005 LGALS9BQ3B8N2 356 aa9.2□□□□□ -0.94
LTBR-208ENST00000541005 POM121L12Q8N7R1 296 aa9.2□□□□□ -0.94
LTBR-208ENST00000541005 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
LTBR-208ENST00000541005 TRAV21A0A0B4J279 112 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 GAGE12BA1L429 117 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 F6UZH7 168 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 PFDN1O60925 122 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 GAGE7O76087 117 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 GAGE12FP0CL80 117 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 GAGE12GP0CL81 117 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 GAGE12IP0CL82 117 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 TPT1P13693 172 aaKnown RBP9.19□□□□□ -0.94
LTBR-208ENST00000541005 FHITP49789 147 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 FLI1Q01543 452 aaPredicted RBP9.19□□□□□ -0.94
LTBR-208ENST00000541005 MUC21Q5SSG8 566 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 MBD3L1Q8WWY6 194 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 TCEAL7Q9BRU2 100 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 PSG8Q9UQ74 426 aa9.19□□□□□ -0.94
LTBR-208ENST00000541005 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 TRGV1A0A0A0MS02 117 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 PEX7O00628 323 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 C1QBP02746 253 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 HOXA5P20719 270 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 UBE2G2P60604 165 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 RNF212Q495C1 297 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 FAM159AQ6UWV7 190 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 HIST1H2BAQ96A08 127 aa9.18□□□□□ -0.94
LTBR-208ENST00000541005 H3BNG1 76 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 PPT1P50897 306 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 TMEM183BQ1AE95 376 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 LGALSLQ3ZCW2 172 aaPredicted RBP9.17□□□□□ -0.94
LTBR-208ENST00000541005 SAPCD1Q5SSQ6 148 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 TMEM183AQ8IXX5 376 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 FAM213BQ8TBF2 198 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 SGK494Q96LW2 274 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 C8orf49Q96NF6 230 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 SPXQ9BT56 116 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 MDFICQ9P1T7 246 aa9.17□□□□□ -0.94
LTBR-208ENST00000541005 TRGV2A0A075B6R0 118 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 IFNA7P01567 189 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 PFN1P07737 140 aaKnown RBP9.16□□□□□ -0.94
LTBR-208ENST00000541005 ZNF80P51504 273 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms