RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ARL6IP6Q8N6S5 226 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 C5orf17Q8NAS9 161 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 TMPRSS5Q9H3S3 457 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 LENEPQ9Y5L5 61 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 MAP1LC3B2A6NCE7 125 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 CBY3A6NI87 242 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 SEC11BP0C7V7 166 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 TCTAP57738 103 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 UBE2G2P60604 165 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 EIF5AP63241 154 aaKnown RBP6.55□□□□□ -1.36
SNHG1-215ENST00000540904 XP32Q5T750 250 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 AKAP14Q86UN6 197 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 TMED6Q8WW62 240 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 SGK494Q96LW2 274 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 MAP1LC3BQ9GZQ8 125 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 APLNQ9ULZ1 77 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 EPDR1Q9UM22 224 aa6.55□□□□□ -1.36
SNHG1-215ENST00000540904 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
SNHG1-215ENST00000540904 SERTM2A0A1B0GWG4 89 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 A0A1W2PRE2 83 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 SNURFLB1AK76 121 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 UMAD1C9J7I0 102 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 K7EQM0 130 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 IFNA7P01567 189 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 TCRAP04437 139 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 TPT1P13693 172 aaKnown RBP6.54□□□□□ -1.36
SNHG1-215ENST00000540904 LGALSLQ3ZCW2 172 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-215ENST00000540904 MUC21Q5SSG8 566 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 EIF4E3Q8N5X7 224 aaKnown RBP6.54□□□□□ -1.36
SNHG1-215ENST00000540904 STOML3Q8TAV4 291 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 FAM213BQ8TBF2 198 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 NDUFAF3Q9BU61 184 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 TREM1Q9NP99 234 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 GSN-AS1Q9NRJ2 163 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 STARD9Q9P2P6 4700 aa6.54□□□□□ -1.36
SNHG1-215ENST00000540904 IGHV1OR15-1A0A075B7D0 117 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 A0A1B0GV50 99 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 GAGE12BA1L429 117 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 FAM74A7A6NL05 159 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 F5H768 121 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 F6UZH7 168 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 GAGE7O76087 117 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 C1QBP02746 253 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 DAZ2Q13117 558 aaKnown RBP6.53□□□□□ -1.36
SNHG1-215ENST00000540904 ANXA2RQ3ZCQ2 193 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 LGALS9CQ6DKI2 356 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 CYB561D1Q8N8Q1 229 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 ZNF680Q8NEM1 530 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 SFT2D1Q8WV19 159 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 TVP23CQ96ET8 276 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 LINC00467Q9BRT7 94 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 ATG101Q9BSB4 218 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 NDFIP1Q9BT67 221 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 NAGKQ9UJ70 344 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 TP53TG3Q9ULZ0 132 aa6.53□□□□□ -1.36
SNHG1-215ENST00000540904 ATP5G1P05496 136 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 ATP5G3P48201 142 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 CST9LP1Q5W188 147 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 Q6AWC8 147 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 TMEM88Q6PEY1 159 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 FAM159AQ6UWV7 190 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 PRNTQ86SH4 94 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 C11orf72Q8NBR9 251 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 FAM210BQ96KR6 192 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 LINC00479Q96M42 142 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 NKX6-2Q9C056 277 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-215ENST00000540904 PSG8Q9UQ74 426 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 KLF12Q9Y4X4 402 aa6.52□□□□□ -1.37
SNHG1-215ENST00000540904 TRGV2A0A075B6R0 118 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 TRGV1A0A0A0MS02 117 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 TRAV34A0A0B4J273 112 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 TRAV21A0A0B4J279 112 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 A0A1B0GVG6 124 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 PEX7O00628 323 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 IGLV2-11P01706 119 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 TCL1AP56279 114 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 FLI1Q01543 452 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-215ENST00000540904 TMEM183BQ1AE95 376 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 IBA57Q5T440 356 aaKnown RBP6.51□□□□□ -1.37
SNHG1-215ENST00000540904 EIF5AL1Q6IS14 154 aaKnown RBP6.51□□□□□ -1.37
SNHG1-215ENST00000540904 DPPA3Q6W0C5 159 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 Q6ZTI0 123 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 TMEM183AQ8IXX5 376 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 LINC00612Q8N6U2 182 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 TMEM75Q8N9X5 138 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 MBD3L1Q8WWY6 194 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 C8orf49Q96NF6 230 aa6.51□□□□□ -1.37
SNHG1-215ENST00000540904 PAGE4O60829 102 aa6.5□□□□□ -1.37
SNHG1-215ENST00000540904 PPT1P50897 306 aa6.5□□□□□ -1.37
SNHG1-215ENST00000540904 ZNF415Q09FC8 603 aa6.5□□□□□ -1.37
SNHG1-215ENST00000540904 ZFP69Q49AA0 526 aa6.5□□□□□ -1.37
SNHG1-215ENST00000540904 HIST1H2BAQ96A08 127 aa6.5□□□□□ -1.37
SNHG1-215ENST00000540904 MRPL16Q9NX20 251 aaKnown RBP6.5□□□□□ -1.37
SNHG1-215ENST00000540904 MDFICQ9P1T7 246 aa6.5□□□□□ -1.37
SNHG1-215ENST00000540904 TRGV11A0A075B6L2 103 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms