RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ZNF576Q9H609 170 aa8.71□□□□□ -1.01
PBX1-212ENST00000540236 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.71□□□□□ -1.02
PBX1-212ENST00000540236 CECR9P0C854 216 aa8.71□□□□□ -1.02
PBX1-212ENST00000540236 CD28P10747 220 aa8.71□□□□□ -1.02
PBX1-212ENST00000540236 SYNJ2BPP57105 145 aa8.71□□□□□ -1.02
PBX1-212ENST00000540236 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
PBX1-212ENST00000540236 PRR19A6NJB7 356 aa8.71□□□□□ -1.02
PBX1-212ENST00000540236 CLEC19AQ6UXS0 136 aa8.7□□□□□ -1.02
PBX1-212ENST00000540236 TMEM243Q9BU79 118 aa8.7□□□□□ -1.02
PBX1-212ENST00000540236 MED12LQ86YW9 2145 aa8.7□□□□□ -1.02
PBX1-212ENST00000540236 WI2-2373I1.2A0A1W2PRP0 233 aa8.7□□□□□ -1.02
PBX1-212ENST00000540236 C15orf65H3BRN8 121 aa8.7□□□□□ -1.02
PBX1-212ENST00000540236 SLC25A15Q9Y619 301 aa8.7□□□□□ -1.02
PBX1-212ENST00000540236 TRBV19A0A075B6N1 114 aa8.7□□□□□ -1.02
PBX1-212ENST00000540236 DSCR8Q96T75 97 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 ATG2AQ2TAZ0 1938 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 C19orf71A6NCJ1 209 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 TRIP6Q15654 476 aaKnown RBP8.69□□□□□ -1.02
PBX1-212ENST00000540236 OPRPNQ99935 248 aaPredicted RBP8.69□□□□□ -1.02
PBX1-212ENST00000540236 TOMM7Q9P0U1 55 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 ICOSQ9Y6W8 199 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 TRAV17A0A0B4J275 112 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
PBX1-212ENST00000540236 RPL39P62891 51 aaKnown RBP8.69□□□□□ -1.02
PBX1-212ENST00000540236 NDUFA4L2Q9NRX3 87 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 LAMA3Q16787 3333 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 TRGV9Q99603 122 aa8.69□□□□□ -1.02
PBX1-212ENST00000540236 LOXP28300 417 aaPredicted RBP8.68□□□□□ -1.02
PBX1-212ENST00000540236 J3QQQ9 107 aa8.68□□□□□ -1.02
PBX1-212ENST00000540236 PSMG4Q5JS54 123 aa8.68□□□□□ -1.02
PBX1-212ENST00000540236 BAALCQ8WXS3 180 aa8.68□□□□□ -1.02
PBX1-212ENST00000540236 CEP350Q5VT06 3117 aa8.68□□□□□ -1.02
PBX1-212ENST00000540236 DUSP14O95147 198 aaKnown RBP8.68□□□□□ -1.02
PBX1-212ENST00000540236 C2orf16Q68DN1 1984 aa8.68□□□□□ -1.02
PBX1-212ENST00000540236 KIR2DL5BQ8NHK3 375 aa8.68□□□□□ -1.02
PBX1-212ENST00000540236 C17orf58Q2M2W7 97 aa8.68□□□□□ -1.02
PBX1-212ENST00000540236 SDK2Q58EX2 2172 aa8.68□□□□□ -1.02
PBX1-212ENST00000540236 BRI3O95415 125 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 CRIPAKQ8N1N5 446 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 B3GALT5-AS1P59052 145 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 DAZAP2Q15038 168 aaPredicted RBP8.67□□□□□ -1.02
PBX1-212ENST00000540236 SEC16AO15027 2179 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 BRWD1Q9NSI6 2320 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 CRYGBP07316 175 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 Q6ZS46 218 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 IGLV3-32A0A0A0MS00 114 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 GP9P14770 177 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 NCKAP5O14513 1909 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 PATE3B3GLJ2 98 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 RHOHQ15669 191 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 MORN3Q6PF18 240 aaPredicted RBP8.67□□□□□ -1.02
PBX1-212ENST00000540236 FAM90A1Q86YD7 464 aa8.67□□□□□ -1.02
PBX1-212ENST00000540236 Q6ZSV7 163 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 NRGNQ92686 78 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 TIMM21Q9BVV7 248 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 CTSZQ9UBR2 303 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 POU2AF1Q16633 256 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 WFDC9Q8NEX5 89 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 METTL26Q96S19 204 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 UBE2E1P51965 193 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 IL11RAQ14626 422 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 COLCA1Q6ZS62 124 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 PEMTQ9UBM1 199 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 NCOA6Q14686 2063 aaPredicted RBP8.66□□□□□ -1.02
PBX1-212ENST00000540236 IGHV3OR16-12A0A075B7B8 117 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 TEX36Q5VZQ5 186 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
PBX1-212ENST00000540236 RBM3P98179 157 aaKnown RBP8.66□□□□□ -1.02
PBX1-212ENST00000540236 DNAJC30Q96LL9 226 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 PRR25Q96S07 402 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 Q9HAA7 133 aa8.66□□□□□ -1.02
PBX1-212ENST00000540236 COL4A4P53420 1690 aaPredicted RBP8.65□□□□□ -1.02
PBX1-212ENST00000540236 IGHV3OR16-10A0A075B7F0 116 aa8.65□□□□□ -1.02
PBX1-212ENST00000540236 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.02
PBX1-212ENST00000540236 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
PBX1-212ENST00000540236 IGHG4P01861 327 aa8.65□□□□□ -1.02
PBX1-212ENST00000540236 CRIP1P50238 77 aa8.65□□□□□ -1.02
PBX1-212ENST00000540236 EXPH5Q8NEV8 1989 aa8.65□□□□□ -1.02
PBX1-212ENST00000540236 P0C879 139 aa8.65□□□□□ -1.02
PBX1-212ENST00000540236 TMEM200BQ69YZ2 307 aa8.65□□□□□ -1.02
PBX1-212ENST00000540236 SHANK2-AS3Q9BTD1 123 aa8.65□□□□□ -1.02
PBX1-212ENST00000540236 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.03
PBX1-212ENST00000540236 MYCNOSP40205 109 aa8.65□□□□□ -1.03
PBX1-212ENST00000540236 CXCL12P48061 93 aa8.65□□□□□ -1.03
PBX1-212ENST00000540236 DYNAPQ8N1N2 210 aa8.65□□□□□ -1.03
PBX1-212ENST00000540236 CDH23Q9H251 3354 aa8.64□□□□□ -1.03
PBX1-212ENST00000540236 LYNX1G3V0Z9 82 aa8.64□□□□□ -1.03
PBX1-212ENST00000540236 LYNX1P0DP58 116 aa8.64□□□□□ -1.03
PBX1-212ENST00000540236 PHLDA1Q8WV24 401 aaPredicted RBP8.64□□□□□ -1.03
PBX1-212ENST00000540236 RBMY1BA6NDE4 496 aaKnown RBP8.64□□□□□ -1.03
PBX1-212ENST00000540236 RBMY1EA6NEQ0 496 aaKnown RBP8.64□□□□□ -1.03
PBX1-212ENST00000540236 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
PBX1-212ENST00000540236 NTN3O00634 580 aaPredicted RBP8.64□□□□□ -1.03
PBX1-212ENST00000540236 RBMY1DP0C7P1 496 aaKnown RBP8.64□□□□□ -1.03
PBX1-212ENST00000540236 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
PBX1-212ENST00000540236 RBMY1CP0DJD4 496 aa8.64□□□□□ -1.03
PBX1-212ENST00000540236 ZNF80P51504 273 aaPredicted RBP8.64□□□□□ -1.03
PBX1-212ENST00000540236 Q0VFX4 171 aa8.64□□□□□ -1.03
PBX1-212ENST00000540236 RBMY1FQ15415 496 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms