RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 TXNDC17Q9BRA2 123 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 OVOL2Q9BRP0 275 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 ATG101Q9BSB4 218 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 AGPAT4-IT1Q9H0P7 198 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 MANBALQ9NQG1 85 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 GNG13Q9P2W3 67 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 EPDR1Q9UM22 224 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 LENEPQ9Y5L5 61 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 ARL2-SNX15V9GYD0 113 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
SNHG1-212ENST00000539975 TRRAPQ9Y4A5 3859 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 TRAV12-2A0A075B6T6 113 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 IGKV2-40A0A087WW87 121 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-212ENST00000539975 TRAV1-1A0A0B4J248 108 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 TRBV7-9A0A0J9YWB2 115 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 PRAC2D3DTV9 90 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 H7BYZ3 331 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 J3KRW8 73 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 PAGE4O60829 102 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 IGKV2D-40P01614 121 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-212ENST00000539975 TCRAP04437 139 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 S100A9P06702 114 aaKnown RBP4.72□□□□□ -1.65
SNHG1-212ENST00000539975 CT45A10P0DMU9 189 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 RNASE4P34096 147 aaKnown RBP4.72□□□□□ -1.65
SNHG1-212ENST00000539975 ERCC8Q13216 396 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 CYB561D1Q8N8Q1 229 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 SUN5Q8TC36 379 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 RETNQ9HD89 108 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 TREM1Q9NP99 234 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 ZNF492Q9P255 531 aa4.72□□□□□ -1.65
SNHG1-212ENST00000539975 TRAV12-3A0A0B4J271 114 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 TEX48A0A1B0GUV7 120 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 C7orf71A4D174 169 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 FAM74A7A6NL05 159 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 B5MCH6 92 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 C11orf94C9JXX5 98 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 PEX7O00628 323 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 PDE6DO43924 150 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 PRB4P10163 310 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-212ENST00000539975 TAS2R60P59551 318 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 FLI1Q01543 452 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-212ENST00000539975 FAM159AQ6UWV7 190 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 AMTNQ6UX39 209 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 SSX7Q7RTT5 188 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 PRNTQ86SH4 94 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 FMC1Q96HJ9 113 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 NEU1Q99519 415 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 VGLL1Q99990 258 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 PYGO2Q9BRQ0 406 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 NOTCH1P46531 2555 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 MEGF8Q7Z7M0 2845 aa4.71□□□□□ -1.66
SNHG1-212ENST00000539975 TRAV21A0A0B4J279 112 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 A0A0J9YWU9 116 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 LOC102723971A0A1B0GUV8 181 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 CXorf65A6NEN9 183 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 CBY3A6NI87 242 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 A8MTW9 85 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 SNURFLB1AK76 121 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 GGTLC3B5MD39 225 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 SPART-AS1P0CW21 52 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 AKR1C3P42330 323 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 EMP1P54849 157 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 GNG5P63218 68 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 MEF2BQ02080 365 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-212ENST00000539975 NDUFA5Q16718 116 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 SMUG1Q53HV7 270 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 TEX261Q6UWH6 196 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 ZNF493Q6ZR52 646 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 TMEM75Q8N9X5 138 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 CSNK1G2-AS1Q8NCQ2 148 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 Q8TAT8 98 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 C11orf45Q8TAV5 145 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 EIF5A2Q9GZV4 153 aaKnown RBP4.7□□□□□ -1.66
SNHG1-212ENST00000539975 VAX2Q9UIW0 290 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 PSG8Q9UQ74 426 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 ZFP30Q9Y2G7 519 aa4.7□□□□□ -1.66
SNHG1-212ENST00000539975 YTHDF2Q9Y5A9 579 aaKnown RBP4.7□□□□□ -1.66
SNHG1-212ENST00000539975 SORL1Q92673 2214 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 IGHV4-28A0A0C4DH34 117 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 GIG44P09565 113 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-212ENST00000539975 CRISP2P16562 243 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 GFI1BQ5VTD9 330 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 ZNF705AQ6ZN79 300 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-212ENST00000539975 ZNF680Q8NEM1 530 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 C16orf74Q96GX8 76 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 KCNS1Q96KK3 526 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 SGK494Q96LW2 274 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 C11orf68Q9H3H3 251 aaKnown RBP4.69□□□□□ -1.66
SNHG1-212ENST00000539975 BIN3Q9NQY0 253 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 MED9Q9NWA0 146 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 NAGKQ9UJ70 344 aa4.69□□□□□ -1.66
SNHG1-212ENST00000539975 TRAV8-1A0A0A6YYK1 113 aa4.68□□□□□ -1.66
SNHG1-212ENST00000539975 TRAV34A0A0B4J273 112 aa4.68□□□□□ -1.66
SNHG1-212ENST00000539975 RBFOX3A6NFN3 312 aa4.68□□□□□ -1.66
SNHG1-212ENST00000539975 FABP5P3A8MUU1 101 aa4.68□□□□□ -1.66
SNHG1-212ENST00000539975 ZNF705GA8MUZ8 300 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-212ENST00000539975 KLLNB2CW77 178 aa4.68□□□□□ -1.66
SNHG1-212ENST00000539975 DEFB4AO15263 64 aa4.68□□□□□ -1.66
SNHG1-212ENST00000539975 CRXO43186 299 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms