RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 UBE2G2P60604 165 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 SUMO1P63165 101 aaKnown RBP7.55□□□□□ -1.2
HMGA2-209ENST00000539662 LGALSLQ3ZCW2 172 aaPredicted RBP7.55□□□□□ -1.2
HMGA2-209ENST00000539662 MUC21Q5SSG8 566 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 TMUB2Q71RG4 321 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 CMTM2Q8TAZ6 248 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 RXFP4Q8TDU9 374 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 LINC00479Q96M42 142 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 PYGO2Q9BRQ0 406 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 KLF12Q9Y4X4 402 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 DNAH2Q9P225 4427 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 IGLV2-11P01706 119 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 TCRAP04437 139 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 AKR1C8PQ5T2L2 129 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 LGALS9CQ6DKI2 356 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 TMEM88Q6PEY1 159 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 ZNF493Q6ZR52 646 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 Q6ZTI0 123 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 LINC00612Q8N6U2 182 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 C8orf49Q96NF6 230 aa7.54□□□□□ -1.2
HMGA2-209ENST00000539662 ZNF471Q9BX82 626 aaPredicted RBP7.54□□□□□ -1.2
HMGA2-209ENST00000539662 TIMM8BQ9Y5J9 83 aaPredicted RBP7.54□□□□□ -1.2
HMGA2-209ENST00000539662 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 IGHV1OR15-1A0A075B7D0 117 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 TRAV34A0A0B4J273 112 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 A0A0D9SG52 128 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 A0A1B0GV50 99 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 GAGE12BA1L429 117 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 MAP1LC3B2A6NCE7 125 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 CBY3A6NI87 242 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 GAGE7O76087 117 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 NMBP08949 121 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
HMGA2-209ENST00000539662 CCDC28AQ8IWP9 274 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 TCTE3Q8IZS6 198 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 EIF4E3Q8N5X7 224 aaKnown RBP7.53□□□□□ -1.2
HMGA2-209ENST00000539662 TMED6Q8WW62 240 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 LINC00467Q9BRT7 94 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 MAP1LC3BQ9GZQ8 125 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 TMEM167BQ9NRX6 74 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 EPDR1Q9UM22 224 aa7.53□□□□□ -1.2
HMGA2-209ENST00000539662 TRBV7-9A0A0J9YWB2 115 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 TEX48A0A1B0GUV7 120 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 KANTRA0A1W2PQU2 76 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 FAM74A7A6NL05 159 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 F5H768 121 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 RGS13O14921 159 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 HOXA5P20719 270 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 ANXA2RQ3ZCQ2 193 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 FAM74A1Q5RGS3 127 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 Q6AWC8 147 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 C5orf17Q8NAS9 161 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 FAM213BQ8TBF2 198 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 NDUFAF3Q9BU61 184 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 PSG8Q9UQ74 426 aa7.52□□□□□ -1.21
HMGA2-209ENST00000539662 A0A1W2PRE2 83 aa7.51□□□□□ -1.21
HMGA2-209ENST00000539662 SNURFLB1AK76 121 aa7.51□□□□□ -1.21
HMGA2-209ENST00000539662 GNRH2O43555 120 aa7.51□□□□□ -1.21
HMGA2-209ENST00000539662 PFDN1O60925 122 aa7.51□□□□□ -1.21
HMGA2-209ENST00000539662 SEC11BP0C7V7 166 aa7.51□□□□□ -1.21
HMGA2-209ENST00000539662 TCL1AP56279 114 aa7.51□□□□□ -1.21
HMGA2-209ENST00000539662 PRNTQ86SH4 94 aa7.51□□□□□ -1.21
HMGA2-209ENST00000539662 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 SPINK4O60575 86 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 C1QBP02746 253 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 ATP5G1P05496 136 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 ATP5G3P48201 142 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 TCTAP57738 103 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 DAZ2Q13117 558 aaKnown RBP7.5□□□□□ -1.21
HMGA2-209ENST00000539662 TMEM183BQ1AE95 376 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 TMEM183AQ8IXX5 376 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 ARL6IP6Q8N6S5 226 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 TMEM75Q8N9X5 138 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 MBD3L1Q8WWY6 194 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 TREM1Q9NP99 234 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
HMGA2-209ENST00000539662 NAGKQ9UJ70 344 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 LENEPQ9Y5L5 61 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 NACAE9PAV3 2078 aa7.5□□□□□ -1.21
HMGA2-209ENST00000539662 TRGV1A0A0A0MS02 117 aa7.49□□□□□ -1.21
HMGA2-209ENST00000539662 CCL20P78556 96 aa7.49□□□□□ -1.21
HMGA2-209ENST00000539662 FLI1Q01543 452 aaPredicted RBP7.49□□□□□ -1.21
HMGA2-209ENST00000539662 LINC01559Q495D7 138 aa7.49□□□□□ -1.21
HMGA2-209ENST00000539662 CYB561D1Q8N8Q1 229 aa7.49□□□□□ -1.21
HMGA2-209ENST00000539662 ZNF680Q8NEM1 530 aa7.49□□□□□ -1.21
HMGA2-209ENST00000539662 STOML3Q8TAV4 291 aa7.49□□□□□ -1.21
HMGA2-209ENST00000539662 SFT2D1Q8WV19 159 aa7.49□□□□□ -1.21
HMGA2-209ENST00000539662 ATG101Q9BSB4 218 aa7.49□□□□□ -1.21
HMGA2-209ENST00000539662 A0A0J9YY99 117 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 PEX7O00628 323 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 PAGE4O60829 102 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 GCGP01275 180 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 IFNA7P01567 189 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 IGHV3-53P01767 116 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 TYMSP04818 313 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms