RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.18□□□□□ -0.78
UBE3B-209ENST00000539584 CCL21O00585 134 aa10.18□□□□□ -0.78
UBE3B-209ENST00000539584 ZNF207O43670 478 aaKnown RBP10.18□□□□□ -0.78
UBE3B-209ENST00000539584 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
UBE3B-209ENST00000539584 SPANXN1Q5VSR9 72 aa10.18□□□□□ -0.78
UBE3B-209ENST00000539584 C8orf86Q6ZUL3 223 aa10.18□□□□□ -0.78
UBE3B-209ENST00000539584 C9orf139Q6ZV77 190 aa10.18□□□□□ -0.78
UBE3B-209ENST00000539584 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
UBE3B-209ENST00000539584 ASPMQ8IZT6 3477 aa10.18□□□□□ -0.78
UBE3B-209ENST00000539584 TRAV8-2A0A0B4J237 113 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 TRAV40A0A0B4J280 105 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 CENPVL3A0A0U1RRI6 287 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 H7C1H1 209 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 ATP6V0E1O15342 81 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 PPP1R17O96001 155 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 NBL1P41271 181 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 GTSCR1Q86UQ5 136 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 RNF182Q8N6D2 247 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 LINC00477Q96M19 166 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 CCDC140Q96MF4 163 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 TMEM160Q9NX00 188 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 MRPL35Q9NZE8 188 aaKnown RBP10.17□□□□□ -0.78
UBE3B-209ENST00000539584 ZNF318Q5VUA4 2279 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 LINC01549A6NIU2 74 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 E9PLD3 99 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 F8VRH5 84 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 LY6HO94772 140 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 MED14OSP0DP75 135 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 GRNP28799 593 aaKnown RBP10.17□□□□□ -0.78
UBE3B-209ENST00000539584 TCTAP57738 103 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 ECSCRQ19T08 205 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 CEP250Q9BV73 2442 aa10.17□□□□□ -0.78
UBE3B-209ENST00000539584 J3QR89 54 aa10.16□□□□□ -0.78
UBE3B-209ENST00000539584 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
UBE3B-209ENST00000539584 CLEC19AQ6UXS0 136 aa10.16□□□□□ -0.78
UBE3B-209ENST00000539584 SMIM2Q9BVW6 85 aa10.16□□□□□ -0.78
UBE3B-209ENST00000539584 POLEQ07864 2286 aa10.16□□□□□ -0.78
UBE3B-209ENST00000539584 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
UBE3B-209ENST00000539584 TRGV3P03979 118 aa10.16□□□□□ -0.78
UBE3B-209ENST00000539584 PPIFP30405 207 aaKnown RBP10.16□□□□□ -0.78
UBE3B-209ENST00000539584 FOXI2Q6ZQN5 318 aa10.16□□□□□ -0.78
UBE3B-209ENST00000539584 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
UBE3B-209ENST00000539584 SMG1Q96Q15 3661 aaKnown RBP10.15□□□□□ -0.78
UBE3B-209ENST00000539584 IGHV3-35A0A0C4DH35 117 aa10.15□□□□□ -0.78
UBE3B-209ENST00000539584 TRBV7-9A0A0J9YWB2 115 aa10.15□□□□□ -0.78
UBE3B-209ENST00000539584 M0R381 172 aa10.15□□□□□ -0.78
UBE3B-209ENST00000539584 ZFP36P26651 326 aaKnown RBP10.15□□□□□ -0.78
UBE3B-209ENST00000539584 ATP5G2Q06055 141 aa10.15□□□□□ -0.78
UBE3B-209ENST00000539584 NAA38Q9BRA0 125 aaKnown RBP10.15□□□□□ -0.78
UBE3B-209ENST00000539584 NHP2Q9NX24 153 aaKnown RBP10.15□□□□□ -0.78
UBE3B-209ENST00000539584 UFC1Q9Y3C8 167 aa10.15□□□□□ -0.78
UBE3B-209ENST00000539584 PCNX1Q96RV3 2341 aa10.15□□□□□ -0.78
UBE3B-209ENST00000539584 OVOL1O14753 267 aa10.14□□□□□ -0.79
UBE3B-209ENST00000539584 CRIP2P52943 208 aaPredicted RBP10.14□□□□□ -0.79
UBE3B-209ENST00000539584 TOMM6Q96B49 74 aa10.14□□□□□ -0.79
UBE3B-209ENST00000539584 C16orf92Q96LL3 132 aa10.14□□□□□ -0.79
UBE3B-209ENST00000539584 BOD1L1Q8NFC6 3051 aa10.14□□□□□ -0.79
UBE3B-209ENST00000539584 IGHV3OR16-8A0A075B7F1 116 aa10.14□□□□□ -0.79
UBE3B-209ENST00000539584 TRAV21A0A0B4J279 112 aa10.14□□□□□ -0.79
UBE3B-209ENST00000539584 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
UBE3B-209ENST00000539584 AJUBAQ96IF1 538 aa10.14□□□□□ -0.79
UBE3B-209ENST00000539584 MAP1BP46821 2468 aaKnown RBP10.13□□□□□ -0.79
UBE3B-209ENST00000539584 IGLL5B9A064 214 aa10.13□□□□□ -0.79
UBE3B-209ENST00000539584 SCGB1A1P11684 91 aa10.13□□□□□ -0.79
UBE3B-209ENST00000539584 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
UBE3B-209ENST00000539584 TM4SF20Q53R12 229 aa10.13□□□□□ -0.79
UBE3B-209ENST00000539584 ITLN2Q8WWU7 325 aaPredicted RBP10.13□□□□□ -0.79
UBE3B-209ENST00000539584 DPH3P1Q9H4G8 78 aa10.13□□□□□ -0.79
UBE3B-209ENST00000539584 APC2O95996 2303 aa10.13□□□□□ -0.79
UBE3B-209ENST00000539584 OR11H12B2RN74 326 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 BRI3O95415 125 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 SAA4P35542 130 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 ADORA2A-AS1P86434 159 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 C12orf74Q32Q52 190 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 OR11H1Q8NG94 326 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 OR11H2Q8NH07 326 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 GLMPQ8WWB7 406 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 ZNF479Q96JC4 524 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 C5orf56Q8N8D9 126 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 OR10J6PQ8NGY7 276 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 HIST1H4GQ99525 98 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 CHTOPQ9Y3Y2 248 aaKnown RBP10.12□□□□□ -0.79
UBE3B-209ENST00000539584 BSNQ9UPA5 3926 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 ACACAQ13085 2346 aa10.12□□□□□ -0.79
UBE3B-209ENST00000539584 UCNP55089 124 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 RIPPLY3P57055 190 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 KLRB1Q12918 225 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 SCGB3A1Q96QR1 104 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 TTTY13Q9BZ97 58 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 TRBV7-3A0A075B6L6 115 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 IGHV3-66A0A0C4DH42 116 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 H3BVH4 76 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 ASIPP42127 132 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 RPL32P62910 135 aaKnown RBP10.11□□□□□ -0.79
UBE3B-209ENST00000539584 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
UBE3B-209ENST00000539584 APRG1Q8IVJ8 170 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms