RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 C17orf77Q96MU5 243 aa11.52□□□□□ -0.57
CACNB1-206ENST00000539338 LINC01619G3V211 115 aa11.52□□□□□ -0.57
CACNB1-206ENST00000539338 RASL10AQ92737 203 aa11.52□□□□□ -0.57
CACNB1-206ENST00000539338 POU2AF1Q16633 256 aa11.51□□□□□ -0.57
CACNB1-206ENST00000539338 Q8N8P6 123 aa11.51□□□□□ -0.57
CACNB1-206ENST00000539338 IGFBPL1Q8WX77 278 aa11.51□□□□□ -0.57
CACNB1-206ENST00000539338 CDPF1Q6NVV7 123 aa11.51□□□□□ -0.57
CACNB1-206ENST00000539338 SIGLEC8Q9NYZ4 499 aa11.51□□□□□ -0.57
CACNB1-206ENST00000539338 CTSZQ9UBR2 303 aa11.51□□□□□ -0.57
CACNB1-206ENST00000539338 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
CACNB1-206ENST00000539338 GTSF1LQ9H1H1 148 aa11.51□□□□□ -0.57
CACNB1-206ENST00000539338 NUP210Q8TEM1 1887 aaPredicted RBP11.51□□□□□ -0.57
CACNB1-206ENST00000539338 NPYP01303 97 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 NEGR1Q7Z3B1 354 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 LY6G5BQ8NDX9 201 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 VWC2Q2TAL6 325 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 ANXA2RQ3ZCQ2 193 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 TRAV12-2A0A075B6T6 113 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 C2orf82Q6UX34 121 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 TRPT1Q86TN4 253 aaKnown RBP11.5□□□□□ -0.57
CACNB1-206ENST00000539338 K7EM74 188 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 ADAMTSL5Q6ZMM2 481 aa11.5□□□□□ -0.57
CACNB1-206ENST00000539338 ZNF625Q96I27 306 aaPredicted RBP11.5□□□□□ -0.57
CACNB1-206ENST00000539338 ZGRF1Q86YA3 2104 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 MED13Q9UHV7 2174 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 IGHV3-16A0A0C4DH30 117 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 PCNX2A6NKB5 2137 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 C22orf46C9J442 243 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 HLA-DMBP28068 263 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 C1orf122Q6ZSJ8 110 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 ZNF491Q8N8L2 437 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 IGLC7A0M8Q6 106 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 MAJINQ3KP22 176 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 PRIMA1Q86XR5 153 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 VPREB3Q9UKI3 123 aa11.49□□□□□ -0.57
CACNB1-206ENST00000539338 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 KRTAP27-1Q3LI81 207 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 LURAP1LQ8IV03 231 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 TRAV8-3A0A0A6YYJ7 113 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 NPSP0C0P6 89 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 GAGE2BQ13066 116 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 GAGE2EQ4V326 116 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 ZNF106Q9H2Y7 1883 aaKnown RBP11.48□□□□□ -0.57
CACNB1-206ENST00000539338 KAAG1Q9UBP8 84 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 GAGE2DQ9UEU5 116 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 MYMXA0A1B0GTQ4 84 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 CLPSL1A2RUU4 121 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 C6orf226Q5I0X4 101 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 JPT2Q9H910 190 aa11.48□□□□□ -0.57
CACNB1-206ENST00000539338 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
CACNB1-206ENST00000539338 NDUFS7O75251 213 aa11.47□□□□□ -0.57
CACNB1-206ENST00000539338 C10orf105Q8TEF2 133 aa11.47□□□□□ -0.57
CACNB1-206ENST00000539338 LTAP01374 205 aa11.47□□□□□ -0.57
CACNB1-206ENST00000539338 SDHAF1A6NFY7 115 aa11.47□□□□□ -0.57
CACNB1-206ENST00000539338 OCIAD2Q56VL3 154 aa11.47□□□□□ -0.57
CACNB1-206ENST00000539338 C9JAW5 83 aa11.46□□□□□ -0.57
CACNB1-206ENST00000539338 CFHR3Q02985 330 aa11.46□□□□□ -0.57
CACNB1-206ENST00000539338 LOXL1Q08397 574 aaPredicted RBP11.46□□□□□ -0.57
CACNB1-206ENST00000539338 Q6ZSR3 168 aa11.46□□□□□ -0.57
CACNB1-206ENST00000539338 CST9LQ9H4G1 147 aa11.46□□□□□ -0.57
CACNB1-206ENST00000539338 SHISA9B4DS77 424 aa11.46□□□□□ -0.57
CACNB1-206ENST00000539338 COL4A3Q01955 1670 aa11.46□□□□□ -0.57
CACNB1-206ENST00000539338 NDUFA4O00483 81 aa11.46□□□□□ -0.57
CACNB1-206ENST00000539338 MRPL35Q9NZE8 188 aaKnown RBP11.46□□□□□ -0.57
CACNB1-206ENST00000539338 KIF26AQ9ULI4 1882 aaPredicted RBP11.46□□□□□ -0.58
CACNB1-206ENST00000539338 COX8AP10176 69 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 ELANEP08246 267 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 ZFAND6Q6FIF0 208 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 OTOGLQ3ZCN5 2332 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 IGHV1OR15-1A0A075B7D0 117 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 GAGE1Q13065 139 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 GAGE4Q13068 117 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 GAGE5Q13069 117 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 PMVKQ15126 192 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 SRCAPQ6ZRS2 3230 aa11.45□□□□□ -0.58
CACNB1-206ENST00000539338 IGHV4-30-2A0A087WSY4 118 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 LHBP01229 141 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 INAFM1C9JVW0 142 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 LEPROTO15243 131 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 FBXL19-AS1Q494R0 122 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 IGHV3-38A0A0C4DH36 116 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 GHRHP01286 108 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 TCTEX1D4Q5JR98 221 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 MORN5Q5VZ52 161 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 DYNAPQ8N1N2 210 aa11.44□□□□□ -0.58
CACNB1-206ENST00000539338 I3L3M4 83 aa11.43□□□□□ -0.58
CACNB1-206ENST00000539338 RITA1Q96K30 269 aa11.43□□□□□ -0.58
CACNB1-206ENST00000539338 TMEM141Q96I45 108 aa11.43□□□□□ -0.58
CACNB1-206ENST00000539338 C9orf118A6NHY6 69 aa11.43□□□□□ -0.58
CACNB1-206ENST00000539338 RMI2Q96E14 147 aa11.43□□□□□ -0.58
CACNB1-206ENST00000539338 DKK2Q9UBU2 259 aa11.43□□□□□ -0.58
CACNB1-206ENST00000539338 F6UB75 175 aa11.43□□□□□ -0.58
CACNB1-206ENST00000539338 SMIM2Q9BVW6 85 aa11.43□□□□□ -0.58
CACNB1-206ENST00000539338 ACACBO00763 2458 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms