RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 FAM74A1Q5RGS3 127 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 IBA57Q5T440 356 aaKnown RBP9.66□□□□□ -0.86
CD9-208ENST00000538834 CCDC28AQ8IWP9 274 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 EIF4E3Q8N5X7 224 aaKnown RBP9.66□□□□□ -0.86
CD9-208ENST00000538834 STOML3Q8TAV4 291 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 MBD3L1Q8WWY6 194 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 J3KRW8 73 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 DAD1P61803 113 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 SUMO1P63165 101 aaKnown RBP9.65□□□□□ -0.86
CD9-208ENST00000538834 GNG5P63218 68 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 AKR1C8PQ5T2L2 129 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 GOLT1AQ6ZVE7 132 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 TMUB2Q71RG4 321 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 HYLS1Q96M11 299 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 TMPRSS5Q9H3S3 457 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
CD9-208ENST00000538834 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
CD9-208ENST00000538834 TRAV8-1A0A0A6YYK1 113 aa9.64□□□□□ -0.87
CD9-208ENST00000538834 FAM74A7A6NL05 159 aa9.64□□□□□ -0.87
CD9-208ENST00000538834 UMAD1C9J7I0 102 aa9.64□□□□□ -0.87
CD9-208ENST00000538834 C1QBP02746 253 aa9.64□□□□□ -0.87
CD9-208ENST00000538834 FHITP49789 147 aa9.64□□□□□ -0.87
CD9-208ENST00000538834 TCL1AP56279 114 aa9.64□□□□□ -0.87
CD9-208ENST00000538834 CMTM2Q8TAZ6 248 aa9.64□□□□□ -0.87
CD9-208ENST00000538834 IGHV1OR15-1A0A075B7D0 117 aa9.63□□□□□ -0.87
CD9-208ENST00000538834 SPINK4O60575 86 aa9.63□□□□□ -0.87
CD9-208ENST00000538834 LY6G6CO95867 125 aa9.63□□□□□ -0.87
CD9-208ENST00000538834 HTN1P15515 57 aa9.63□□□□□ -0.87
CD9-208ENST00000538834 ZNF680Q8NEM1 530 aa9.63□□□□□ -0.87
CD9-208ENST00000538834 NDUFAF3Q9BU61 184 aa9.63□□□□□ -0.87
CD9-208ENST00000538834 KLF12Q9Y4X4 402 aa9.63□□□□□ -0.87
CD9-208ENST00000538834 ARL2-SNX15V9GYD0 113 aa9.63□□□□□ -0.87
CD9-208ENST00000538834 KANTRA0A1W2PQU2 76 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 FBLL1A6NHQ2 334 aaKnown RBP9.62□□□□□ -0.87
CD9-208ENST00000538834 ATP5G1P05496 136 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 ATP5G3P48201 142 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 FGF8P55075 233 aaPredicted RBP9.62□□□□□ -0.87
CD9-208ENST00000538834 DPPA3Q6W0C5 159 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 COX8CQ7Z4L0 72 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 TMEM75Q8N9X5 138 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 ATG101Q9BSB4 218 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 ZNF471Q9BX82 626 aaPredicted RBP9.62□□□□□ -0.87
CD9-208ENST00000538834 NKX6-2Q9C056 277 aaPredicted RBP9.62□□□□□ -0.87
CD9-208ENST00000538834 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 DNAH17Q9UFH2 4485 aa9.62□□□□□ -0.87
CD9-208ENST00000538834 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
CD9-208ENST00000538834 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
CD9-208ENST00000538834 ZNF80P51504 273 aaPredicted RBP9.61□□□□□ -0.87
CD9-208ENST00000538834 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
CD9-208ENST00000538834 Q6ZTI0 123 aa9.61□□□□□ -0.87
CD9-208ENST00000538834 CYB561D1Q8N8Q1 229 aa9.61□□□□□ -0.87
CD9-208ENST00000538834 PSG8Q9UQ74 426 aa9.61□□□□□ -0.87
CD9-208ENST00000538834 EPPK1P58107 5090 aaKnown RBP9.61□□□□□ -0.87
CD9-208ENST00000538834 DNAH2Q9P225 4427 aa9.6□□□□□ -0.87
CD9-208ENST00000538834 SNURFLB1AK76 121 aa9.6□□□□□ -0.87
CD9-208ENST00000538834 EIF5AP63241 154 aaKnown RBP9.6□□□□□ -0.87
CD9-208ENST00000538834 FLI1Q01543 452 aaPredicted RBP9.6□□□□□ -0.87
CD9-208ENST00000538834 TMEM88Q6PEY1 159 aa9.6□□□□□ -0.87
CD9-208ENST00000538834 TREM1Q9NP99 234 aa9.6□□□□□ -0.87
CD9-208ENST00000538834 C11orf21Q9P2W6 132 aa9.6□□□□□ -0.87
CD9-208ENST00000538834 TRAV1-1A0A0B4J248 108 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 TRBV6-1A0A0K0K1D8 114 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 RGS13O14921 159 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 TPT1P13693 172 aaKnown RBP9.59□□□□□ -0.87
CD9-208ENST00000538834 HOXA5P20719 270 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 C15orf53Q8NAA6 179 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 HIST1H2BAQ96A08 127 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 SGK494Q96LW2 274 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 TCEAL7Q9BRU2 100 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 MDFICQ9P1T7 246 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 RPH3ALQ9UNE2 315 aa9.59□□□□□ -0.87
CD9-208ENST00000538834 TRAV21A0A0B4J279 112 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 H3BNG1 76 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 P0DMU3 169 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 ZNF575Q86XF7 245 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 C9orf62Q8N4C0 152 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 POM121L12Q8N7R1 296 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 RASL10AQ92737 203 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 C8orf49Q96NF6 230 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 FAT2Q9NYQ8 4349 aa9.58□□□□□ -0.88
CD9-208ENST00000538834 IGHV3-16A0A0C4DH30 117 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 GAGE12BA1L429 117 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 K7EQM0 130 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 PEX7O00628 323 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 GAGE7O76087 117 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 GAGE12FP0CL80 117 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 GAGE12GP0CL81 117 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 GAGE12IP0CL82 117 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 SULT1A2P50226 295 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 UBE2G2P60604 165 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 RNF212Q495C1 297 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 MUC21Q5SSG8 566 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 SPXQ9BT56 116 aa9.57□□□□□ -0.88
CD9-208ENST00000538834 A0A1B0GVG6 124 aa9.56□□□□□ -0.88
CD9-208ENST00000538834 F5H768 121 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms