RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 C19orf73Q9NVV2 129 aa10.45□□□□□ -0.74
CD4-208ENST00000538827 SNAPINO95295 136 aa10.44□□□□□ -0.74
CD4-208ENST00000538827 BTN1A1Q13410 526 aa10.44□□□□□ -0.74
CD4-208ENST00000538827 PRR9Q5T870 116 aa10.44□□□□□ -0.74
CD4-208ENST00000538827 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
CD4-208ENST00000538827 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
CD4-208ENST00000538827 ISOC2Q96AB3 205 aa10.44□□□□□ -0.74
CD4-208ENST00000538827 ODF3Q96PU9 254 aa10.44□□□□□ -0.74
CD4-208ENST00000538827 BIN3Q9NQY0 253 aa10.44□□□□□ -0.74
CD4-208ENST00000538827 ZMAT5Q9UDW3 170 aaKnown RBP10.44□□□□□ -0.74
CD4-208ENST00000538827 LENEPQ9Y5L5 61 aa10.44□□□□□ -0.74
CD4-208ENST00000538827 GPX1P07203 203 aa10.43□□□□□ -0.74
CD4-208ENST00000538827 TSPOP30536 169 aa10.43□□□□□ -0.74
CD4-208ENST00000538827 KRTAP10-11P60412 298 aa10.43□□□□□ -0.74
CD4-208ENST00000538827 MLST8Q9BVC4 326 aa10.43□□□□□ -0.74
CD4-208ENST00000538827 RNASE7Q9H1E1 156 aaKnown RBP10.43□□□□□ -0.74
CD4-208ENST00000538827 TRAV12-2A0A075B6T6 113 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 SH2D1AO60880 128 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 CRISP2P16562 243 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
CD4-208ENST00000538827 ZNF80P51504 273 aaPredicted RBP10.42□□□□□ -0.74
CD4-208ENST00000538827 ERVFC1-1P60608 527 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 EGFEM1PQ0D2K5 195 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 IBA57Q5T440 356 aaKnown RBP10.42□□□□□ -0.74
CD4-208ENST00000538827 AMTNQ6UX39 209 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 ZFAND2AQ8N6M9 145 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 C15orf54Q8N8G6 183 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
CD4-208ENST00000538827 FAM19A4Q96LR4 140 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 RPS10P5Q9NQ39 176 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 NAGKQ9UJ70 344 aa10.42□□□□□ -0.74
CD4-208ENST00000538827 TRBV7-9A0A0J9YWB2 115 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 C7orf71A4D174 169 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 A8MTW9 85 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 CDKN1BP46527 198 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 RHEBQ15382 184 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 RNF212Q495C1 297 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 FAM162BQ5T6X4 162 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 OR10G8Q8NGN5 311 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 SFRP2Q96HF1 295 aa10.41□□□□□ -0.74
CD4-208ENST00000538827 C7orf77A4D0Y5 90 aa10.4□□□□□ -0.74
CD4-208ENST00000538827 ZNF705GA8MUZ8 300 aaPredicted RBP10.4□□□□□ -0.74
CD4-208ENST00000538827 GATCO43716 136 aaKnown RBP10.4□□□□□ -0.74
CD4-208ENST00000538827 P01737 135 aa10.4□□□□□ -0.74
CD4-208ENST00000538827 MT-ND4LP03901 98 aa10.4□□□□□ -0.74
CD4-208ENST00000538827 GFI1BQ5VTD9 330 aa10.4□□□□□ -0.74
CD4-208ENST00000538827 ATRAIDQ6UW56 229 aa10.4□□□□□ -0.74
CD4-208ENST00000538827 LINC00322Q6ZN03 302 aaPredicted RBP10.4□□□□□ -0.74
CD4-208ENST00000538827 TUBA4BQ9H853 241 aa10.4□□□□□ -0.74
CD4-208ENST00000538827 TRAV12-3A0A0B4J271 114 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 TRAV21A0A0B4J279 112 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 KLLNB2CW77 178 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 B4DEV8 164 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 H7BYZ3 331 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 INSP01308 110 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 AMBPP02760 352 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 NUTF2P61970 127 aaKnown RBP10.39□□□□□ -0.75
CD4-208ENST00000538827 COX8CQ7Z4L0 72 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 Q8N1Y9 231 aa10.39□□□□□ -0.75
CD4-208ENST00000538827 TMSB15BA0A087X1C1 80 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 FABP5P3A8MUU1 101 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 PPP1R2P9O14990 202 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 CA1P00915 261 aaPredicted RBP10.38□□□□□ -0.75
CD4-208ENST00000538827 PFN1P07737 140 aaKnown RBP10.38□□□□□ -0.75
CD4-208ENST00000538827 CRIP1P50238 77 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 RPL19P84098 196 aaKnown RBP10.38□□□□□ -0.75
CD4-208ENST00000538827 MUC21Q5SSG8 566 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 MORN3Q6PF18 240 aaPredicted RBP10.38□□□□□ -0.75
CD4-208ENST00000538827 NUDT10Q8NFP7 164 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 OR2D3Q8NGH3 330 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 NUDT11Q96G61 164 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 CLUHP3Q96NS8 147 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
CD4-208ENST00000538827 OSTCQ9NRP0 149 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 XCL2Q9UBD3 114 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 TENM3Q9P273 2699 aa10.38□□□□□ -0.75
CD4-208ENST00000538827 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
CD4-208ENST00000538827 TMEM189A5PLL7 270 aa10.37□□□□□ -0.75
CD4-208ENST00000538827 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
CD4-208ENST00000538827 ORM1P02763 201 aa10.37□□□□□ -0.75
CD4-208ENST00000538827 IGHV4-30-4P0DP06 118 aa10.37□□□□□ -0.75
CD4-208ENST00000538827 Q6AWC8 147 aa10.37□□□□□ -0.75
CD4-208ENST00000538827 Q6ZQT7 251 aa10.37□□□□□ -0.75
CD4-208ENST00000538827 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
CD4-208ENST00000538827 ANAPC16Q96DE5 110 aa10.37□□□□□ -0.75
CD4-208ENST00000538827 SCO1O75880 301 aa10.36□□□□□ -0.75
CD4-208ENST00000538827 PRB2P02812 416 aaPredicted RBP10.36□□□□□ -0.75
CD4-208ENST00000538827 V9GYV3 84 aa10.36□□□□□ -0.75
CD4-208ENST00000538827 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
CD4-208ENST00000538827 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
CD4-208ENST00000538827 RBMY1A1P0DJD3 496 aaKnown RBP10.35□□□□□ -0.75
CD4-208ENST00000538827 RBMY1CP0DJD4 496 aa10.35□□□□□ -0.75
CD4-208ENST00000538827 TCL1AP56279 114 aa10.35□□□□□ -0.75
CD4-208ENST00000538827 RBMY1FQ15415 496 aaKnown RBP10.35□□□□□ -0.75
CD4-208ENST00000538827 TMEM208Q9BTX3 173 aa10.35□□□□□ -0.75
CD4-208ENST00000538827 CTDSP1Q9GZU7 261 aa10.35□□□□□ -0.75
CD4-208ENST00000538827 C11orf21Q9P2W6 132 aa10.35□□□□□ -0.75
CD4-208ENST00000538827 A0A087WWC5 75 aa10.34□□□□□ -0.75
CD4-208ENST00000538827 GRIFINA4D1Z8 144 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms