RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PPP1R1CQ8WVI7 109 aa2.75□□□□□ -1.97
PTPN22-211ENST00000538253 SCRT1Q9BWW7 348 aa2.75□□□□□ -1.97
PTPN22-211ENST00000538253 WDR61Q9GZS3 305 aaKnown RBP2.75□□□□□ -1.97
PTPN22-211ENST00000538253 RNASE7Q9H1E1 156 aaKnown RBP2.75□□□□□ -1.97
PTPN22-211ENST00000538253 PRO0628Q9UI54 55 aa2.75□□□□□ -1.97
PTPN22-211ENST00000538253 IGHV4OR15-8A0A075B7B6 117 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 A0A087WW49 117 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 K7EP34 96 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 IL4P05112 153 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 CRYBB3P26998 211 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 SYNJ2BPP57105 145 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 EWSR1Q01844 656 aaKnown RBP eCLIP2.74□□□□□ -1.97
PTPN22-211ENST00000538253 TMEM97Q5BJF2 176 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 C10orf55Q5SWW7 151 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 KPRPQ5T749 579 aaPredicted RBP2.74□□□□□ -1.97
PTPN22-211ENST00000538253 HIST2H2BDQ6DRA6 164 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 RASL11AQ6T310 242 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 FAM159AQ6UWV7 190 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 CMTM2Q8TAZ6 248 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 TPSG1Q9NRR2 321 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 SPANXA1Q9NS26 97 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 TMEM14CQ9P0S9 112 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 FAM231BA6NCW3 169 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 IGLV1-51P01701 117 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 LINC00869P0C866 280 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 CBLN1P23435 193 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 LEPP41159 167 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 MPV17L2Q567V2 206 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 KIAA2026Q5HYC2 2103 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 MEIG1Q5JSS6 88 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 ZFAND6Q6FIF0 208 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 DGAT2L7PQ6IED9 249 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 RBMXL1Q96E39 390 aaKnown RBP2.74□□□□□ -1.97
PTPN22-211ENST00000538253 RHPN1-AS1Q9BWJ2 59 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 SLC35B3Q9H1N7 401 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 VSIRQ9H7M9 311 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 NRN1Q9NPD7 142 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 LINC00527Q9UJ94 153 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 TP53TG1Q9Y2A0 90 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 FLNCQ14315 2725 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 DMXL2Q8TDJ6 3036 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 TRAV3A0A0B4J244 114 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 J3KT08 172 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 MALP21145 153 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 FAM3BP58499 235 aaPredicted RBP2.74□□□□□ -1.97
PTPN22-211ENST00000538253 BRWD1-AS2P59051 145 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 EGFEM1PQ0D2K5 195 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 SAMD5Q5TGI4 173 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 ASPHD1Q5U4P2 390 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 HRCT1Q6UXD1 115 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 OR10J6PQ8NGY7 276 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 GGTLC1Q9BX51 225 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 EIF5A2Q9GZV4 153 aaKnown RBP2.74□□□□□ -1.97
PTPN22-211ENST00000538253 EDA2RQ9HAV5 297 aa2.74□□□□□ -1.97
PTPN22-211ENST00000538253 POLQO75417 2590 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 TRBV24-1A0A075B6N3 115 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 A0A087X0K7 114 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 MUC21A0A0G2JKD1 596 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 MUC21A0A140T8X8 626 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 NUPR1O60356 82 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 OXTP01178 125 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 CRYGDP07320 174 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 CTSGP08311 255 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 SEC11BP0C7V7 166 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 XGP55808 180 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 TAL2Q16559 108 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 LINC01620Q4KN68 170 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 MUC21Q5SSG8 566 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 BVES-AS1Q5T3Y7 98 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 TMEM256Q8N2U0 113 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 OR5C1Q8NGR4 320 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 TAF15Q92804 592 aaKnown RBP eCLIP2.73□□□□□ -1.97
PTPN22-211ENST00000538253 RITA1Q96K30 269 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 C16orf92Q96LL3 132 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 IMMP2LQ96T52 175 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 SHANK2-AS3Q9BTD1 123 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 LENEPQ9Y5L5 61 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 SOX21Q9Y651 276 aaPredicted RBP2.73□□□□□ -1.97
PTPN22-211ENST00000538253 DSCAML1Q8TD84 2053 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 WI2-2373I1.2A0A1W2PRP0 233 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 HSBP1O75506 76 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 PRH1P02810 166 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 SLC25A5P05141 298 aaKnown RBP2.73□□□□□ -1.97
PTPN22-211ENST00000538253 CSN3P07498 182 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 EVI2AP22794 236 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 DEFB114Q30KQ6 69 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 C11orf44Q8N8P7 122 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 TMEM170AQ8WVE7 144 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 TMEM37Q8WXS4 190 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 DLX4Q92988 240 aaPredicted RBP2.73□□□□□ -1.97
PTPN22-211ENST00000538253 ODF3Q96PU9 254 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 KLK15Q9H2R5 256 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 PARLQ9H300 379 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 CYTL1Q9NRR1 136 aa2.73□□□□□ -1.97
PTPN22-211ENST00000538253 TRBV20-1A0A075B6N2 111 aa2.72□□□□□ -1.97
PTPN22-211ENST00000538253 CTXND1A0A1B0GTU2 59 aa2.72□□□□□ -1.97
PTPN22-211ENST00000538253 UBE2L5PA0A1B0GUS4 154 aa2.72□□□□□ -1.97
PTPN22-211ENST00000538253 FAM24AA6NFZ4 105 aa2.72□□□□□ -1.97
PTPN22-211ENST00000538253 CXorf1O96002 111 aa2.72□□□□□ -1.97
PTPN22-211ENST00000538253 IL15RAQ13261 267 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms