RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MT-ND4LP03901 98 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 IBA57Q5T440 356 aaKnown RBP5.42□□□□□ -1.54
MSH6-209ENST00000538136 SBSPONQ8IVN8 264 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 TRBV9A0A0B4J1U6 114 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 TCRAP04437 139 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 ODF3L2Q3SX64 289 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 ANXA2RQ3ZCQ2 193 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 KCNIP4Q6PIL6 250 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 ZFP82Q8N141 532 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 C1QTNF4Q9BXJ3 329 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 ARL2-SNX15V9GYD0 113 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 GGTLC3B5MD39 225 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 FAM210BQ96KR6 192 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 C20orf173Q96LM9 149 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 SLC25A2Q9BXI2 301 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 H3BRN7 92 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 STAG3L2P0CL84 134 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 STAG3L3P0CL85 134 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 ASIPP42127 132 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 SULT1A2P50226 295 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 MRGPRG-AS1Q2M3A8 158 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 OR10J3Q5JRS4 329 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 OR10G8Q8NGN5 311 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 ZNF414Q96IQ9 312 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 SSBP4Q9BWG4 385 aaPredicted RBP5.41□□□□□ -1.54
MSH6-209ENST00000538136 NAT8BQ9UHF3 227 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 S100A6P06703 90 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 EVI2AP22794 236 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 FAM222AQ5U5X8 452 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 C16orf54Q6UWD8 224 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 C11orf45Q8TAV5 145 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 SMCO4Q9NRQ5 59 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 CYTL1Q9NRR1 136 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 TP53TG3Q9ULZ0 132 aa5.41□□□□□ -1.54
MSH6-209ENST00000538136 FABP5P3A8MUU1 101 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 ARMS2P0C7Q2 107 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 ADAMTSL5Q6ZMM2 481 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 CHCHD5Q9BSY4 110 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 INSL3P51460 131 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 RHEBQ15382 184 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 ZNF726P1Q15940 193 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 NEGR1Q7Z3B1 354 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 GPR82Q96P67 336 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 C16orf95Q9H693 158 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 SDF2L1Q9HCN8 221 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 OTORQ9NRC9 128 aa5.4□□□□□ -1.54
MSH6-209ENST00000538136 TRAV21A0A0B4J279 112 aa5.4□□□□□ -1.55
MSH6-209ENST00000538136 NCR2O95944 276 aa5.4□□□□□ -1.55
MSH6-209ENST00000538136 RAB5AP20339 215 aa5.4□□□□□ -1.55
MSH6-209ENST00000538136 JPT2Q9H910 190 aa5.4□□□□□ -1.55
MSH6-209ENST00000538136 U3KQE9 123 aa5.4□□□□□ -1.55
MSH6-209ENST00000538136 P0C879 139 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 AZU1P20160 251 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 AMMECR1LQ6DCA0 310 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 OCC1Q8TAD7 63 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
MSH6-209ENST00000538136 KRTAP10-11P60412 298 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 PSMG3Q9BT73 122 aaPredicted RBP5.39□□□□□ -1.55
MSH6-209ENST00000538136 ZFAND3Q9H8U3 227 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 MDFICQ9P1T7 246 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 A0A087WX48 190 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 FAM74A7A6NL05 159 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 NMBP08949 121 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 PRR20EP86478 221 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 PRR20CP86479 221 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 PRR20DP86480 221 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 PRR20BP86481 221 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 PRR20AP86496 221 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 MANBALQ9NQG1 85 aa5.39□□□□□ -1.55
MSH6-209ENST00000538136 IGLV1-51P01701 117 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 ZNF345Q14585 488 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 SAPCD1Q5SSQ6 148 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 FXYD5Q96DB9 178 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 SMKR1H3BMG3 65 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 PSCAO43653 123 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 FCER1GP30273 86 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 LSM4Q9Y4Z0 139 aaKnown RBP5.38□□□□□ -1.55
MSH6-209ENST00000538136 Q6ZTI0 123 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 ASB13Q8WXK3 278 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 PRELID1Q9Y255 219 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 H3BMM0 161 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 K7EQG2 157 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 SH2D1AO60880 128 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 RNF212Q495C1 297 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 BAGE3Q86Y29 109 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 THAP8Q8NA92 274 aa5.38□□□□□ -1.55
MSH6-209ENST00000538136 C11orf68Q9H3H3 251 aaKnown RBP5.38□□□□□ -1.55
MSH6-209ENST00000538136 TRAV26-2A0A0B4J265 109 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 C7orf71A4D174 169 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 DIRC3C9JPN6 131 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 K7EIL1 84 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 LEPP41159 167 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 IL15RAQ13261 267 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 FAM162BQ5T6X4 162 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 SAMD13Q5VXD3 122 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 KLF12Q9Y4X4 402 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 BTF3P20290 206 aaKnown RBP5.37□□□□□ -1.55
MSH6-209ENST00000538136 FOXI2Q6ZQN5 318 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 Q8N1Y9 231 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 TNFRSF18Q9Y5U5 241 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms