RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 TMEM88Q6PEY1 159 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 LINC00612Q8N6U2 182 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 TVP23CQ96ET8 276 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 SGK494Q96LW2 274 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 LENEPQ9Y5L5 61 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 RGS13O14921 159 aa12.2□□□□□ -0.46
GPN3-202ENST00000537466 BCL2L11O43521 198 aa12.2□□□□□ -0.46
GPN3-202ENST00000537466 TCRAP04437 139 aa12.2□□□□□ -0.46
GPN3-202ENST00000537466 SUMO1P63165 101 aaKnown RBP12.2□□□□□ -0.46
GPN3-202ENST00000537466 C5orf17Q8NAS9 161 aa12.2□□□□□ -0.46
GPN3-202ENST00000537466 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
GPN3-202ENST00000537466 IGHV1OR15-1A0A075B7D0 117 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 KANTRA0A1W2PQU2 76 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 GAGE12BA1L429 117 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 GAGE7O76087 117 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 ATP5G1P05496 136 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 GAGE12FP0CL80 117 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 GAGE12GP0CL81 117 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 GAGE12IP0CL82 117 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 ATP5G3P48201 142 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 FHITP49789 147 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 Q6AWC8 147 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 ZNF680Q8NEM1 530 aa12.19□□□□□ -0.46
GPN3-202ENST00000537466 ZNF471Q9BX82 626 aaPredicted RBP12.19□□□□□ -0.46
GPN3-202ENST00000537466 DNAH6Q9C0G6 4158 aa12.18□□□□□ -0.46
GPN3-202ENST00000537466 F5H768 121 aa12.18□□□□□ -0.46
GPN3-202ENST00000537466 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
GPN3-202ENST00000537466 MUC21Q5SSG8 566 aa12.18□□□□□ -0.46
GPN3-202ENST00000537466 Q6ZTI0 123 aa12.18□□□□□ -0.46
GPN3-202ENST00000537466 KLF12Q9Y4X4 402 aa12.18□□□□□ -0.46
GPN3-202ENST00000537466 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
GPN3-202ENST00000537466 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
GPN3-202ENST00000537466 F6UZH7 168 aa12.17□□□□□ -0.46
GPN3-202ENST00000537466 UBE2G2P60604 165 aa12.17□□□□□ -0.46
GPN3-202ENST00000537466 TMUB2Q71RG4 321 aa12.17□□□□□ -0.46
GPN3-202ENST00000537466 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
GPN3-202ENST00000537466 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
GPN3-202ENST00000537466 SEC11BP0C7V7 166 aa12.16□□□□□ -0.46
GPN3-202ENST00000537466 TCL1AP56279 114 aa12.16□□□□□ -0.46
GPN3-202ENST00000537466 IBA57Q5T440 356 aaKnown RBP12.16□□□□□ -0.46
GPN3-202ENST00000537466 TCTE3Q8IZS6 198 aa12.16□□□□□ -0.46
GPN3-202ENST00000537466 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
GPN3-202ENST00000537466 NACAE9PAV3 2078 aa12.16□□□□□ -0.46
GPN3-202ENST00000537466 SERTM2A0A1B0GWG4 89 aa12.15□□□□□ -0.46
GPN3-202ENST00000537466 PFDN1O60925 122 aa12.15□□□□□ -0.46
GPN3-202ENST00000537466 IGLV2-11P01706 119 aa12.15□□□□□ -0.46
GPN3-202ENST00000537466 PSG8Q9UQ74 426 aa12.15□□□□□ -0.46
GPN3-202ENST00000537466 hCG_2014768A0A024R1R8 64 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 FAM74A7A6NL05 159 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 P0DMU3 169 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 FAM231AP0DMU4 169 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 FAM231CP0DMU5 169 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 CYB561D1Q8N8Q1 229 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 C8orf49Q96NF6 230 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 EPPK1P58107 5090 aaKnown RBP12.14□□□□□ -0.47
GPN3-202ENST00000537466 TRGV1A0A0A0MS02 117 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 K7EQM0 130 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 SPINK4O60575 86 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 HOXA5P20719 270 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 LGALSLQ3ZCW2 172 aaPredicted RBP12.14□□□□□ -0.47
GPN3-202ENST00000537466 LINC00479Q96M42 142 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 ATG101Q9BSB4 218 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 MDFICQ9P1T7 246 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 NAGKQ9UJ70 344 aa12.14□□□□□ -0.47
GPN3-202ENST00000537466 FLI1Q01543 452 aaPredicted RBP12.13□□□□□ -0.47
GPN3-202ENST00000537466 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
GPN3-202ENST00000537466 FAM159AQ6UWV7 190 aa12.13□□□□□ -0.47
GPN3-202ENST00000537466 PRNTQ86SH4 94 aa12.13□□□□□ -0.47
GPN3-202ENST00000537466 TMEM183AQ8IXX5 376 aa12.13□□□□□ -0.47
GPN3-202ENST00000537466 POM121L12Q8N7R1 296 aa12.13□□□□□ -0.47
GPN3-202ENST00000537466 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
GPN3-202ENST00000537466 C15orf53Q8NAA6 179 aa12.13□□□□□ -0.47
GPN3-202ENST00000537466 FAM213BQ8TBF2 198 aa12.13□□□□□ -0.47
GPN3-202ENST00000537466 MUC4Q99102 2169 aa12.12□□□□□ -0.47
GPN3-202ENST00000537466 TRAV34A0A0B4J273 112 aa12.12□□□□□ -0.47
GPN3-202ENST00000537466 TRAV21A0A0B4J279 112 aa12.12□□□□□ -0.47
GPN3-202ENST00000537466 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
GPN3-202ENST00000537466 IFNA7P01567 189 aa12.12□□□□□ -0.47
GPN3-202ENST00000537466 TPT1P13693 172 aaKnown RBP12.12□□□□□ -0.47
GPN3-202ENST00000537466 ZNF80P51504 273 aaPredicted RBP12.12□□□□□ -0.47
GPN3-202ENST00000537466 ZNF415Q09FC8 603 aa12.12□□□□□ -0.47
GPN3-202ENST00000537466 OR5I1Q13606 314 aa12.12□□□□□ -0.47
GPN3-202ENST00000537466 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
GPN3-202ENST00000537466 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
GPN3-202ENST00000537466 TRGV2A0A075B6R0 118 aa12.11□□□□□ -0.47
GPN3-202ENST00000537466 PEX7O00628 323 aa12.11□□□□□ -0.47
GPN3-202ENST00000537466 C1QBP02746 253 aa12.11□□□□□ -0.47
GPN3-202ENST00000537466 EIF5AP63241 154 aaKnown RBP12.11□□□□□ -0.47
GPN3-202ENST00000537466 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
GPN3-202ENST00000537466 STOML3Q8TAV4 291 aa12.11□□□□□ -0.47
GPN3-202ENST00000537466 MBD3L1Q8WWY6 194 aa12.11□□□□□ -0.47
GPN3-202ENST00000537466 A0A1B0GV50 99 aa12.1□□□□□ -0.47
GPN3-202ENST00000537466 GNRH2O43555 120 aa12.1□□□□□ -0.47
GPN3-202ENST00000537466 NUDT3O95989 172 aa12.1□□□□□ -0.47
GPN3-202ENST00000537466 SFT2D1Q8WV19 159 aa12.1□□□□□ -0.47
GPN3-202ENST00000537466 C18orf15Q96N68 181 aa12.1□□□□□ -0.47
GPN3-202ENST00000537466 NKX6-2Q9C056 277 aaPredicted RBP12.1□□□□□ -0.47
GPN3-202ENST00000537466 TRGV11A0A075B6L2 103 aa12.09□□□□□ -0.47
GPN3-202ENST00000537466 TRAV26-1A0A087WT03 109 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms