RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 CYB561D1Q8N8Q1 229 aa8.06□□□□□ -1.12
TNFRSF1A-208ENST00000536194 TMEM263Q8WUH6 116 aaKnown RBP8.06□□□□□ -1.12
TNFRSF1A-208ENST00000536194 C16orf74Q96GX8 76 aa8.06□□□□□ -1.12
TNFRSF1A-208ENST00000536194 LINC00479Q96M42 142 aa8.06□□□□□ -1.12
TNFRSF1A-208ENST00000536194 PYGO2Q9BRQ0 406 aa8.06□□□□□ -1.12
TNFRSF1A-208ENST00000536194 NIPSNAP3BQ9BS92 247 aa8.06□□□□□ -1.12
TNFRSF1A-208ENST00000536194 ATG101Q9BSB4 218 aa8.06□□□□□ -1.12
TNFRSF1A-208ENST00000536194 TRAV34A0A0B4J273 112 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 PAGE4O60829 102 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 RAB5CP51148 216 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 Q6AWC8 147 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 EIF5AL1Q6IS14 154 aaKnown RBP8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 C8orf49Q96NF6 230 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 LINC00467Q9BRT7 94 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 TP53TG3Q9ULZ0 132 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 PSG8Q9UQ74 426 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 ARL2-SNX15V9GYD0 113 aa8.05□□□□□ -1.12
TNFRSF1A-208ENST00000536194 TRAV1-1A0A0B4J248 108 aa8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 PEX7O00628 323 aa8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 IFNA7P01567 189 aa8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 FLI1Q01543 452 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 CST9LP1Q5W188 147 aa8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 ALKAL2Q6UX46 152 aa8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 ZNF493Q6ZR52 646 aa8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 TMEM75Q8N9X5 138 aa8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 NKX6-2Q9C056 277 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 TREM1Q9NP99 234 aa8.04□□□□□ -1.12
TNFRSF1A-208ENST00000536194 TEX48A0A1B0GUV7 120 aa8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 LYRM9A8MSI8 78 aa8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 C11orf94C9JXX5 98 aa8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 ZNF80P51504 273 aaPredicted RBP8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 ANXA2RQ3ZCQ2 193 aa8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 MUC21Q5SSG8 566 aa8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 PRNTQ86SH4 94 aa8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 EIF4E3Q8N5X7 224 aaKnown RBP8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 NOP10Q9NPE3 64 aaKnown RBP8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 TIMM8BQ9Y5J9 83 aaPredicted RBP8.03□□□□□ -1.12
TNFRSF1A-208ENST00000536194 KMT2CQ8NEZ4 4911 aaKnown RBP8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 IGHV1OR15-1A0A075B7D0 117 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TRAV10A0A0B4J240 114 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 K7EQM0 130 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 RGS13O14921 159 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 DAD1P61803 113 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 Q86TA4 180 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 LINC00612Q8N6U2 182 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 HIST1H2BAQ96A08 127 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GSN-AS1Q9NRJ2 163 aa8.02□□□□□ -1.13
TNFRSF1A-208ENST00000536194 DEFB131BA0A096LNP1 70 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 SCO2A0A1W2PP80 73 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 CBY3A6NI87 242 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 DEFB130BP0DP73 79 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 DEFB130AP0DP74 79 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 C2CD4CQ8TF44 421 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 NDFIP1Q9BT67 221 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GNG13Q9P2W3 67 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 C11orf21Q9P2W6 132 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 KLK5Q9Y337 293 aaPredicted RBP8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 KLF12Q9Y4X4 402 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TENM2Q9NT68 2774 aa8.01□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TRAV21A0A0B4J279 112 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 LCE6AA0A183 80 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 FBLL1A6NHQ2 334 aaKnown RBP8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GCGP01275 180 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 PPT1P50897 306 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TCL1AP56279 114 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 DAZ2Q13117 558 aaKnown RBP8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TDRG1Q3Y452 100 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 IBA57Q5T440 356 aaKnown RBP8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 ZNF680Q8NEM1 530 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TCEAL7Q9BRU2 100 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 MANBALQ9NQG1 85 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 MDFICQ9P1T7 246 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 NAGKQ9UJ70 344 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 APLNQ9ULZ1 77 aa8□□□□□ -1.13
TNFRSF1A-208ENST00000536194 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 IGHV4-4A0A075B6R2 117 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 SNURFLB1AK76 121 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 IGLL5B9A064 214 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GNRH2O43555 120 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 PFN1P07737 140 aaKnown RBP7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 HTN3P15516 51 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 AKR1C3P42330 323 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TMEM183BQ1AE95 376 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 SMUG1Q53HV7 270 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 SAPCD1Q5SSQ6 148 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 FAM159AQ6UWV7 190 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 Q6ZTI0 123 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TMEM183AQ8IXX5 376 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 FMC1Q96HJ9 113 aa7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 PLECQ15149 4684 aaKnown RBP7.99□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TRBV6-1A0A0K0K1D8 114 aa7.98□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
TNFRSF1A-208ENST00000536194 SPINK4O60575 86 aa7.98□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GAGE7O76087 117 aa7.98□□□□□ -1.13
TNFRSF1A-208ENST00000536194 LTAP01374 205 aa7.98□□□□□ -1.13
TNFRSF1A-208ENST00000536194 TYMSP04818 313 aa7.98□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GAGE12FP0CL80 117 aa7.98□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GAGE12GP0CL81 117 aa7.98□□□□□ -1.13
TNFRSF1A-208ENST00000536194 GAGE12IP0CL82 117 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms