RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TRAV34A0A0B4J273 112 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 TRBV7-9A0A0J9YWB2 115 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 F6UZH7 168 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 H2AFB1P0C5Y9 115 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 SPART-AS1P0CW21 52 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 ATP5G3P48201 142 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 SULT1A2P50226 295 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 CCDC28AQ8IWP9 274 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 NIPSNAP3BQ9BS92 247 aa12.73□□□□□ -0.37
DDX55-204ENST00000536079 DNAH1Q9P2D7 4330 aa12.72□□□□□ -0.37
DDX55-204ENST00000536079 PAGE4O60829 102 aa12.72□□□□□ -0.37
DDX55-204ENST00000536079 C8orf49Q96NF6 230 aa12.72□□□□□ -0.37
DDX55-204ENST00000536079 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
DDX55-204ENST00000536079 CYB561D1Q8N8Q1 229 aa12.71□□□□□ -0.37
DDX55-204ENST00000536079 TMEM263Q8WUH6 116 aaKnown RBP12.71□□□□□ -0.37
DDX55-204ENST00000536079 C16orf74Q96GX8 76 aa12.71□□□□□ -0.37
DDX55-204ENST00000536079 PYGO2Q9BRQ0 406 aa12.71□□□□□ -0.37
DDX55-204ENST00000536079 ATG101Q9BSB4 218 aa12.71□□□□□ -0.37
DDX55-204ENST00000536079 LENEPQ9Y5L5 61 aa12.71□□□□□ -0.37
DDX55-204ENST00000536079 NUPR2A6NF83 97 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 PEX7O00628 323 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 IFNA7P01567 189 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 ZNF80P51504 273 aaPredicted RBP12.7□□□□□ -0.38
DDX55-204ENST00000536079 CST9LP1Q5W188 147 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 Q6AWC8 147 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 C11orf72Q8NBR9 251 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 LINC00467Q9BRT7 94 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 NOP10Q9NPE3 64 aaKnown RBP12.7□□□□□ -0.38
DDX55-204ENST00000536079 ALMS1Q8TCU4 4167 aa12.7□□□□□ -0.38
DDX55-204ENST00000536079 SERTM2A0A1B0GWG4 89 aa12.69□□□□□ -0.38
DDX55-204ENST00000536079 RAB5CP51148 216 aa12.69□□□□□ -0.38
DDX55-204ENST00000536079 FLI1Q01543 452 aaPredicted RBP12.69□□□□□ -0.38
DDX55-204ENST00000536079 MUC21Q5SSG8 566 aa12.69□□□□□ -0.38
DDX55-204ENST00000536079 EIF5AL1Q6IS14 154 aaKnown RBP12.69□□□□□ -0.38
DDX55-204ENST00000536079 TMEM75Q8N9X5 138 aa12.69□□□□□ -0.38
DDX55-204ENST00000536079 TREM1Q9NP99 234 aa12.69□□□□□ -0.38
DDX55-204ENST00000536079 HYDINQ4G0P3 5121 aa12.68□□□□□ -0.38
DDX55-204ENST00000536079 IGHV1OR15-1A0A075B7D0 117 aa12.68□□□□□ -0.38
DDX55-204ENST00000536079 TRAV1-1A0A0B4J248 108 aa12.68□□□□□ -0.38
DDX55-204ENST00000536079 DEFB130BP0DP73 79 aa12.68□□□□□ -0.38
DDX55-204ENST00000536079 DEFB130AP0DP74 79 aa12.68□□□□□ -0.38
DDX55-204ENST00000536079 ALKAL2Q6UX46 152 aa12.68□□□□□ -0.38
DDX55-204ENST00000536079 ZNF493Q6ZR52 646 aa12.68□□□□□ -0.38
DDX55-204ENST00000536079 EIF4E3Q8N5X7 224 aaKnown RBP12.68□□□□□ -0.38
DDX55-204ENST00000536079 GSN-AS1Q9NRJ2 163 aa12.68□□□□□ -0.38
DDX55-204ENST00000536079 DEFB131BA0A096LNP1 70 aa12.67□□□□□ -0.38
DDX55-204ENST00000536079 TRAV10A0A0B4J240 114 aa12.67□□□□□ -0.38
DDX55-204ENST00000536079 CBY3A6NI87 242 aa12.67□□□□□ -0.38
DDX55-204ENST00000536079 RGS13O14921 159 aa12.67□□□□□ -0.38
DDX55-204ENST00000536079 ANXA2RQ3ZCQ2 193 aa12.67□□□□□ -0.38
DDX55-204ENST00000536079 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
DDX55-204ENST00000536079 C11orf21Q9P2W6 132 aa12.67□□□□□ -0.38
DDX55-204ENST00000536079 KLF12Q9Y4X4 402 aa12.67□□□□□ -0.38
DDX55-204ENST00000536079 TIMM8BQ9Y5J9 83 aaPredicted RBP12.67□□□□□ -0.38
DDX55-204ENST00000536079 LYRM9A8MSI8 78 aa12.66□□□□□ -0.38
DDX55-204ENST00000536079 K7EQM0 130 aa12.66□□□□□ -0.38
DDX55-204ENST00000536079 DAD1P61803 113 aa12.66□□□□□ -0.38
DDX55-204ENST00000536079 HIST1H2BAQ96A08 127 aa12.66□□□□□ -0.38
DDX55-204ENST00000536079 GNG13Q9P2W3 67 aa12.66□□□□□ -0.38
DDX55-204ENST00000536079 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
DDX55-204ENST00000536079 SCO2A0A1W2PP80 73 aa12.65□□□□□ -0.38
DDX55-204ENST00000536079 IGLL5B9A064 214 aa12.65□□□□□ -0.38
DDX55-204ENST00000536079 C11orf94C9JXX5 98 aa12.65□□□□□ -0.38
DDX55-204ENST00000536079 Q86TA4 180 aa12.65□□□□□ -0.38
DDX55-204ENST00000536079 LINC00612Q8N6U2 182 aa12.65□□□□□ -0.38
DDX55-204ENST00000536079 C2CD4CQ8TF44 421 aa12.65□□□□□ -0.38
DDX55-204ENST00000536079 MDFICQ9P1T7 246 aa12.65□□□□□ -0.38
DDX55-204ENST00000536079 KLK5Q9Y337 293 aaPredicted RBP12.65□□□□□ -0.38
DDX55-204ENST00000536079 LCE6AA0A183 80 aa12.64□□□□□ -0.39
DDX55-204ENST00000536079 TEX48A0A1B0GUV7 120 aa12.64□□□□□ -0.39
DDX55-204ENST00000536079 GNRH2O43555 120 aa12.64□□□□□ -0.39
DDX55-204ENST00000536079 HTN3P15516 51 aa12.64□□□□□ -0.39
DDX55-204ENST00000536079 NAGKQ9UJ70 344 aa12.64□□□□□ -0.39
DDX55-204ENST00000536079 APLNQ9ULZ1 77 aa12.64□□□□□ -0.39
DDX55-204ENST00000536079 GCGP01275 180 aa12.63□□□□□ -0.39
DDX55-204ENST00000536079 Q6ZTI0 123 aa12.63□□□□□ -0.39
DDX55-204ENST00000536079 NDFIP1Q9BT67 221 aa12.63□□□□□ -0.39
DDX55-204ENST00000536079 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 GAGE12BA1L429 117 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 SNURFLB1AK76 121 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 GAGE7O76087 117 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 CRIP1P50238 77 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 TCL1AP56279 114 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 DAZ2Q13117 558 aaKnown RBP12.62□□□□□ -0.39
DDX55-204ENST00000536079 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 TMEM183AQ8IXX5 376 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 ZNF680Q8NEM1 530 aa12.62□□□□□ -0.39
DDX55-204ENST00000536079 VPS13DQ5THJ4 4388 aa12.61□□□□□ -0.39
DDX55-204ENST00000536079 AKR1C3P42330 323 aa12.61□□□□□ -0.39
DDX55-204ENST00000536079 PPT1P50897 306 aa12.61□□□□□ -0.39
DDX55-204ENST00000536079 TDRG1Q3Y452 100 aa12.61□□□□□ -0.39
DDX55-204ENST00000536079 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
DDX55-204ENST00000536079 SAPCD1Q5SSQ6 148 aa12.61□□□□□ -0.39
DDX55-204ENST00000536079 ZC2HC1AQ96GY0 325 aa12.61□□□□□ -0.39
DDX55-204ENST00000536079 TRBV6-1A0A0K0K1D8 114 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms