RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TRAV5A0A0B4J249 113 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 RBAKDNA6NC62 111 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 M0R3E3 92 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 EREGO14944 169 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 NXPH4O95158 308 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 DNAH10OSP0CZ25 163 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 ERVFC1-1P60608 527 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 FHL2Q14192 279 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 MIC13Q5XKP0 118 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 LYPD5Q6UWN5 251 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 OR11H4Q8NGC9 324 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 FAM167A-AS1Q96KT0 104 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 ZNF492Q9P255 531 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 BOLA1Q9Y3E2 137 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 LENEPQ9Y5L5 61 aa7.62□□□□□ -1.19
CLSTN3-206ENST00000535668 A0A087WTM6 91 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 G3V3Q6 166 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 TAAR5O14804 337 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 PAX4O43316 350 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 H2BFSP57053 126 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 HBG1P69891 147 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 HBG2P69892 147 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 TDRG1Q3Y452 100 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 Q5BKY6 102 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 NEGR1Q7Z3B1 354 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 KCNRGQ8N5I3 272 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 TMEM252Q8N6L7 170 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 INO80EQ8NBZ0 244 aaPredicted RBP7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 TMED6Q8WW62 240 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 C2orf50Q96LR7 162 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 GSKIPQ9P0R6 139 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 HHLA3Q9XRX5 114 aa7.61□□□□□ -1.19
CLSTN3-206ENST00000535668 IGHV1OR15-1A0A075B7D0 117 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 TRGV1A0A0A0MS02 117 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 KANTRA0A1W2PQU2 76 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 H3BTX0 84 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 GPX1P07203 203 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 PVALBP20472 110 aaPredicted RBP7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 VAMP2P63027 116 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 ZNF266Q14584 549 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 EIF5AL1Q6IS14 154 aaKnown RBP7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 TMUB2Q71RG4 321 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 ARL6IP6Q8N6S5 226 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 OR10G4Q8NGN3 311 aa7.6□□□□□ -1.19
CLSTN3-206ENST00000535668 CST7O76096 145 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 SCGB1D2O95969 90 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 ORM1P02763 201 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 SNRPCP09234 159 aaKnown RBP7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 CAV2P51636 162 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 ZNF415Q09FC8 603 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 BTN1A1Q13410 526 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 Q6AWC8 147 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 SH2D6Q7Z4S9 175 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 C10orf126Q8N4M7 172 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 SPXQ9BT56 116 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 NPCDR1Q9BY65 106 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 AAMDCQ9H7C9 122 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 TNFSF18Q9UNG2 199 aa7.59□□□□□ -1.19
CLSTN3-206ENST00000535668 FAM24AA6NFZ4 105 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 NBEAP1P0C6P0 100 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 INAFM2P0DMQ5 153 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 RNASE4P34096 147 aaKnown RBP7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 ZNF138P52744 262 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 ERCC8Q13216 396 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 TMEM78Q5T7P6 136 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 PRR9Q5T870 116 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 STX12Q86Y82 276 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 PPP1R1CQ8WVI7 109 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 TMEM70Q9BUB7 260 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 SLC25A2Q9BXI2 301 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 TIMM9Q9Y5J7 89 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 LY96Q9Y6Y9 160 aa7.58□□□□□ -1.2
CLSTN3-206ENST00000535668 FXYD6-FXYD2A0A087WZ82 144 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 IGSF23A1L1A6 192 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 RNF222A6NCQ9 220 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 C5orf51A6NDU8 294 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 SMLR1H3BR10 107 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 K7EQD1 137 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 ARPC5O15511 151 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 BCL2L11O43521 198 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 MPC2O95563 127 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 PRB4P10163 310 aaPredicted RBP7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 EXOC3-AS1Q8N2X6 119 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 STOML3Q8TAV4 291 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 FXYD5Q96DB9 178 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 MSRB1Q9NZV6 116 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 DNAH8Q96JB1 4490 aa7.57□□□□□ -1.2
CLSTN3-206ENST00000535668 LRCOL1A6NCL2 159 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 CIDEAO60543 219 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 PYYP10082 97 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 EVI2AP22794 236 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 ICAM4Q14773 271 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 Q5VSD8 79 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 SLC7A5P1Q8MH63 180 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 FRZBQ92765 325 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 AQP10Q96PS8 301 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 ARPC5LQ9BPX5 153 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 OR51M1Q9H341 326 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms