RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 ZNF138P52744 262 aa13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 LRRC75A-AS1Q8N1F1 130 aa13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 PEF1Q9UBV8 284 aaKnown RBP13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 PAM16Q9Y3D7 125 aa13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 A0A087X0K7 114 aa13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 PMCHL1Q16048 86 aa13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 FAM162BQ5T6X4 162 aa13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 ZNF738Q8NE65 137 aa13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 C18orf32Q8TCD1 76 aa13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 WIPF2Q8TF74 440 aaPredicted RBP13.9□□□□□ -0.18
HTATSF1-204ENST00000535601 TMEM189A5PLL7 270 aa13.89□□□□□ -0.19
HTATSF1-204ENST00000535601 LYZL1Q6UWQ5 148 aa13.89□□□□□ -0.19
HTATSF1-204ENST00000535601 Q6ZWC4 215 aa13.89□□□□□ -0.19
HTATSF1-204ENST00000535601 C11orf44Q8N8P7 122 aa13.89□□□□□ -0.19
HTATSF1-204ENST00000535601 TMEM190Q8WZ59 177 aa13.89□□□□□ -0.19
HTATSF1-204ENST00000535601 HIVEP2P31629 2446 aa13.89□□□□□ -0.19
HTATSF1-204ENST00000535601 KIR3DS1Q14943 382 aa13.89□□□□□ -0.19
HTATSF1-204ENST00000535601 FLNBO75369 2602 aaKnown RBP13.89□□□□□ -0.19
HTATSF1-204ENST00000535601 A0A0G2JLM5 398 aa13.88□□□□□ -0.19
HTATSF1-204ENST00000535601 TRBV6-1A0A0K0K1D8 114 aa13.88□□□□□ -0.19
HTATSF1-204ENST00000535601 FOXE3Q13461 319 aa13.88□□□□□ -0.19
HTATSF1-204ENST00000535601 CT83Q5H943 113 aa13.88□□□□□ -0.19
HTATSF1-204ENST00000535601 ZNF575Q86XF7 245 aa13.88□□□□□ -0.19
HTATSF1-204ENST00000535601 C11orf21Q9P2W6 132 aa13.88□□□□□ -0.19
HTATSF1-204ENST00000535601 KHDC1LQ5JSQ8 128 aa13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 PRR9Q5T870 116 aa13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 SLC50A1Q9BRV3 221 aa13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 MSRB1Q9NZV6 116 aa13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 A0A1W2PS18 150 aa13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 H3BUA1 57 aa13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 CSN3P07498 182 aa13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 SYNJ2BPP57105 145 aa13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 ALKBH7Q9BT30 221 aaPredicted RBP13.87□□□□□ -0.19
HTATSF1-204ENST00000535601 A0A1B0GUT8 65 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 SERTM2A0A1B0GWG4 89 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 AMTP48728 403 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 RNASEKQ6P5S7 137 aaKnown RBP13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 CLEC5AQ9NY25 188 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 KIR2DL5BA0A0G2JN68 375 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 KIR2DL5BA0A0G2JPC4 375 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 KIR2DL5AQ8N109 375 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 OR4B1Q8NGF8 309 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 SMR3AQ99954 134 aa13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 TIMM8BQ9Y5J9 83 aaPredicted RBP13.86□□□□□ -0.19
HTATSF1-204ENST00000535601 IGHV4OR15-8A0A075B7B6 117 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 A0A087WW49 117 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 Q0VG73 95 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 SAPCD1Q5SSQ6 148 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 DAZ1Q9NQZ3 744 aaKnown RBP13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 IGHV7-4-1A0A0J9YVY3 117 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 RAB4AP20338 218 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 S100A7P31151 101 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 FN1P02751 2386 aaKnown RBP13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 TMEM78Q5T7P6 136 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 GFRA4Q9GZZ7 299 aa13.85□□□□□ -0.19
HTATSF1-204ENST00000535601 ATP5L2Q7Z4Y8 100 aa13.84□□□□□ -0.19
HTATSF1-204ENST00000535601 HIST1H1AQ02539 215 aaPredicted RBP13.83□□□□□ -0.19
HTATSF1-204ENST00000535601 NDFIP1Q9BT67 221 aa13.83□□□□□ -0.19
HTATSF1-204ENST00000535601 KRTDAPP60985 99 aa13.83□□□□□ -0.2
HTATSF1-204ENST00000535601 URB1-AS1Q96HZ7 61 aa13.83□□□□□ -0.2
HTATSF1-204ENST00000535601 C9orf139Q6ZV77 190 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 KCNS1Q96KK3 526 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 VAMP8Q9BV40 100 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 NRN1Q9NPD7 142 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 SMKR1H3BMG3 65 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 COX19Q49B96 90 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 AMN1Q8IY45 258 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 SMPXQ9UHP9 88 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 SOCS3O14543 225 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 IGKV3-20P01619 116 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 GPX1P07203 203 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 SLURP1P55000 103 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 FAM106AQ4KMX7 169 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 RASL11AQ6T310 242 aa13.82□□□□□ -0.2
HTATSF1-204ENST00000535601 LOC102724200A0A096LPH7 203 aaPredicted RBP13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 IGKV3D-20A0A0C4DH25 116 aa13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 HAX1O00165 279 aa13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 OR10J3Q5JRS4 329 aa13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 ESM1Q9NQ30 184 aa13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 TWIST1Q15672 202 aa13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 PRSS57Q6UWY2 283 aa13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 TMEM208Q9BTX3 173 aa13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 YAE1D1Q9NRH1 226 aa13.81□□□□□ -0.2
HTATSF1-204ENST00000535601 FABP5P3A8MUU1 101 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 PAFAH1B2P68402 229 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 ZNF688P0C7X2 276 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 KLHDC1Q8N7A1 406 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 FER1L6-AS1Q8NA97 138 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 GAS8-AS1O95177 125 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 BRI3O95415 125 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 NCR2O95944 276 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 NPSP0C0P6 89 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 HOXD3P31249 432 aaPredicted RBP13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 KRTAP1-1Q07627 177 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 NIT1Q86X76 327 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 ATP6V0BQ99437 205 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 MIEN1Q9BRT3 115 aa13.8□□□□□ -0.2
HTATSF1-204ENST00000535601 ZNF324O75467 553 aaPredicted RBP13.79□□□□□ -0.2
HTATSF1-204ENST00000535601 LOC389332A0A1B0GUA5 103 aa13.79□□□□□ -0.2
HTATSF1-204ENST00000535601 FAM231BA6NCW3 169 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms