RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 KCNIP2Q9NS61 270 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 TP53TG3Q9ULZ0 132 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 KLF12Q9Y4X4 402 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 HSPB11Q9Y547 144 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 A0A096LPF7 62 aa6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 C17orf112F2Z3M2 114 aa6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 J3QL48 77 aa6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 KRTAP10-2P60368 255 aa6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 TMEM78Q5T7P6 136 aa6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 FRZBQ92765 325 aa6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 Q9H3A6 140 aa6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 MRPS16Q9Y3D3 137 aaKnown RBP6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
CLSTN3-203ENST00000534830 IGHV1OR15-1A0A075B7D0 117 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 TRGV1A0A0A0MS02 117 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 A0A1W2PPQ1 181 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 BTF3P20290 206 aaKnown RBP6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 RPL12P30050 165 aaKnown RBP6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 ZNF138P52744 262 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 ZNF266Q14584 549 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 Q6AWC8 147 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 ST6GAL2Q96JF0 529 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 WFDC1Q9HC57 220 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 LENEPQ9Y5L5 61 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 FAT1Q14517 4588 aa6.92□□□□□ -1.3
CLSTN3-203ENST00000534830 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 DIRC3C9JPN6 131 aa6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 RGS13O14921 159 aa6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 OR7C2O60412 319 aa6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 PET100P0DJ07 73 aa6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 RANP62826 216 aaKnown RBP6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 FFAR4Q5NUL3 377 aa6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 Q8TAT8 98 aa6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 MBD2Q9UBB5 411 aa6.91□□□□□ -1.3
CLSTN3-203ENST00000534830 SSNA1O43805 119 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 CSN1S1P47710 185 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 DEFA1P59665 94 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 DEFA3P59666 94 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 FHL2Q14192 279 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 KHDC3LQ587J8 217 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 TTC32Q5I0X7 151 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 IQCF2Q8IXL9 164 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 ARL6IP6Q8N6S5 226 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 TMED6Q8WW62 240 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 SMIM3Q9BZL3 60 aa6.9□□□□□ -1.3
CLSTN3-203ENST00000534830 IFNA5P01569 189 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 CRYBA4P53673 196 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 TAS2R45P59539 299 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 UBE2L3P68036 154 aaKnown RBP6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 SLAQ13239 276 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 TDRG1Q3Y452 100 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 SCGB1C1Q8TD33 95 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 RASL10AQ92737 203 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 OTORQ9NRC9 128 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 MRPL16Q9NX20 251 aaKnown RBP6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 MDFICQ9P1T7 246 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 PRO0255Q9UI72 69 aa6.89□□□□□ -1.31
CLSTN3-203ENST00000534830 PGPA6NDG6 321 aa6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 PAX4O43316 350 aa6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 EIF3GO75821 320 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 ZNF415Q09FC8 603 aa6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 PQLC2Q6ZP29 291 aa6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 SUN5Q8TC36 379 aa6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 TVP23CQ96ET8 276 aa6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 ARPC5LQ9BPX5 153 aa6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 HHLA3Q9XRX5 114 aa6.88□□□□□ -1.31
CLSTN3-203ENST00000534830 SIVA1O15304 175 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 IGHV3-53P01767 116 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 XGP55808 180 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 ACOT6Q3I5F7 207 aaPredicted RBP6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 MUC21Q5SSG8 566 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 LYPD5Q6UWN5 251 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 OR10G4Q8NGN3 311 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 SPXQ9BT56 116 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 ALG5Q9Y673 324 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
CLSTN3-203ENST00000534830 STAG3L2P0CL84 134 aa6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 STAG3L3P0CL85 134 aa6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 FUSP35637 526 aaKnown RBP eCLIP6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 LINC00315P59091 139 aa6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 RAB2AP61019 212 aa6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 MRPL23Q16540 153 aaKnown RBP6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 OR2G3Q8NGZ4 309 aa6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 ZNF479Q96JC4 524 aa6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 HYLS1Q96M11 299 aa6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 BATF3Q9NR55 127 aa6.86□□□□□ -1.31
CLSTN3-203ENST00000534830 TRGV11A0A075B6L2 103 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 A0A1W2PPV4 95 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 K7EQD1 137 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 GNRH2O43555 120 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 NXPH4O95158 308 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 SMR3BP02814 79 aaPredicted RBP6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 SFTA3P0C7M3 94 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 TMEM183BQ1AE95 376 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 FAM74A1Q5RGS3 127 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 FAM159AQ6UWV7 190 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 GOLT1AQ6ZVE7 132 aa6.85□□□□□ -1.31
CLSTN3-203ENST00000534830 TMEM183AQ8IXX5 376 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms