RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TLN2Q9Y4G6 2542 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 LRBAP50851 2863 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 TRAV17A0A0B4J275 112 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 FAM236DA0A1B0GTK5 79 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 GOLGA8KD6RF30 607 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 H0Y980 276 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 KPNA3O00505 521 aaPredicted RBP-1.2□□□□□ -2.6
COPB1-212ENST00000534771 TAX1BP3O14907 124 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 IFNA4P05014 189 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 C8GP07360 202 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 FAM236CP0DP71 79 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 COX5BP10606 129 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 ATP5G3P48201 142 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 PIGPP57054 158 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 DEFA3P59666 94 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 ACOT6Q3I5F7 207 aaPredicted RBP-1.2□□□□□ -2.6
COPB1-212ENST00000534771 IZUMO2Q6UXV1 221 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 SSBP3-AS1Q7Z2R9 100 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 LINC00269Q8N2A0 174 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 GNPDA2Q8TDQ7 276 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 TEX37Q96LM6 180 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 SIKE1Q9BRV8 207 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 AGPAT3Q9NRZ7 376 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 FGFR1OP2Q9NVK5 253 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 COA4Q9NYJ1 87 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 ZFHX3Q15911 3703 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.2□□□□□ -2.6
COPB1-212ENST00000534771 DNAH8Q96JB1 4490 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 PRUNE2Q8WUY3 3088 aa-1.2□□□□□ -2.6
COPB1-212ENST00000534771 TRAV12-2A0A075B6T6 113 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 TRAV22A0A0B4J277 110 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 hADV38S2A0JD32 116 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 TRPC5OSA6NMA1 111 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 BBIP1A8MTZ0 92 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 M0QZ92 97 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 NDUFS6O75380 124 aaKnown RBP-1.21□□□□□ -2.6
COPB1-212ENST00000534771 TNNC2P02585 160 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 TTRP02766 147 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 TPM2P07951 284 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 PYYP10082 97 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 HIST3H3Q16695 136 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 IMPG1Q17R60 797 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 TCTEX1D1Q8N7M0 179 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 PPP1R1CQ8WVI7 109 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 DMAC1Q96GE9 116 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 DCUN1D1Q96GG9 259 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 OR4C12Q96R67 309 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 CMSS1Q9BQ75 279 aaKnown RBP-1.21□□□□□ -2.6
COPB1-212ENST00000534771 C7orf50Q9BRJ6 194 aaKnown RBP-1.21□□□□□ -2.6
COPB1-212ENST00000534771 EFCAB11Q9BUY7 163 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 MAP1LC3BQ9GZQ8 125 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 PIK3C2AO00443 1686 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 USP54Q70EL1 1684 aa-1.21□□□□□ -2.6
COPB1-212ENST00000534771 SPTBN1Q01082 2364 aaKnown RBP-1.21□□□□□ -2.6
COPB1-212ENST00000534771 C9orf84Q5VXU9 1444 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 TRAV4A0A0B4J268 109 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 FABP12A6NFH5 140 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 LRRN3E7EW58 273 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 TPST1O60507 370 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 CST8O60676 142 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 DCTN3O75935 186 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 SPINK8P0C7L1 97 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 MT1HL1P0DM35 61 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 EMX2Q04743 252 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 MED21Q13503 144 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 TMEM141Q96I45 108 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 CACYBPQ9HB71 228 aaKnown RBP-1.22□□□□□ -2.6
COPB1-212ENST00000534771 IMP3Q9NV31 184 aaKnown RBP-1.22□□□□□ -2.6
COPB1-212ENST00000534771 TMEM242Q9NWH2 141 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 GLTPQ9NZD2 209 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 UBR2Q8IWV8 1755 aa-1.22□□□□□ -2.6
COPB1-212ENST00000534771 HELZP42694 1942 aaKnown RBP-1.23□□□□□ -2.61
COPB1-212ENST00000534771 ARHGAP31Q2M1Z3 1444 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 IQSEC2Q5JU85 1478 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 SNAPC4Q5SXM2 1469 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 N4BP2Q86UW6 1770 aaPredicted RBP-1.23□□□□□ -2.61
COPB1-212ENST00000534771 TMEM30CPA0ZSE6 113 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 M0R2T5 61 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 RER1O15258 196 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 CHP2O43745 196 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 CALUO43852 315 aaPredicted RBP-1.23□□□□□ -2.61
COPB1-212ENST00000534771 CNIH1O95406 144 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 CRHP06850 196 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 OCM2P0CE71 109 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 PSMB6P28072 239 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 UBE2G2P60604 165 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 MT1HP80294 61 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 DEFA5Q01523 94 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 OR2F1Q13607 317 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 IFT20Q8IY31 132 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 TREM1Q9NP99 234 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 BET1LQ9NYM9 111 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 COMMD3Q9UBI1 195 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 NUP210LQ5VU65 1888 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 PIK3C2GO75747 1445 aa-1.23□□□□□ -2.61
COPB1-212ENST00000534771 ZFHX4Q86UP3 3567 aa-1.24□□□□□ -2.61
COPB1-212ENST00000534771 A0A0A6YYH2 397 aa-1.24□□□□□ -2.61
COPB1-212ENST00000534771 TGIF2-C20orf24A0A0A6YYL0 155 aa-1.24□□□□□ -2.61
COPB1-212ENST00000534771 C3orf85A0A1B0GTC6 90 aa-1.24□□□□□ -2.61
COPB1-212ENST00000534771 ARL5CA6NH57 179 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms