RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 ZNF562Q6V9R5 426 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 RBPMS2Q6ZRY4 209 aaKnown RBP6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 ZNF491Q8N8L2 437 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 TMEM75Q8N9X5 138 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 NUP35Q8NFH5 326 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 RITA1Q96K30 269 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 SHANK2-AS3Q9BTD1 123 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 SLC25A39Q9BZJ4 359 aaPredicted RBP6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 WFDC10AQ9H1F0 79 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 PRO1933Q9H354 126 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 Q9H3A6 140 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 TP53TG3Q9ULZ0 132 aa6.33□□□□□ -1.4
SHARPIN-210ENST00000534435 A0A1B0GXF2 115 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 GRIFINA4D1Z8 144 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 HIGD1CA8MV81 97 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 ZNF705FA8MVS1 300 aaPredicted RBP6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 ZNF705DP0CH99 300 aaPredicted RBP6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 ZNF705BP0CI00 300 aaPredicted RBP6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 PSG1P11464 419 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 SRIP30626 198 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 RAB9AP51151 201 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 LINC00310P59036 64 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 HBBP68871 147 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 SSBP2P81877 361 aaPredicted RBP6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 FXYD3Q14802 87 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 C5orf64Q2M2E5 130 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 KLK9Q2XQG4 91 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 ZNF600Q6ZNG1 722 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 Q6ZWC4 215 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 TTC9CQ8N5M4 171 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 NHLRC2Q8NBF2 726 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 BORCS7Q96B45 105 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 NEU1Q99519 415 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 MIEN1Q9BRT3 115 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 VAMP8Q9BV40 100 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 FBXL15Q9H469 300 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 MRPL36Q9P0J6 103 aaKnown RBP6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 KLK9Q9UKQ9 250 aa6.32□□□□□ -1.4
SHARPIN-210ENST00000534435 TRBV19A0A075B6N1 114 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 A0A1W2PS18 150 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 H3BRN7 92 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 K7EIM0 57 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 NUPR1O60356 82 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 IGKV1-17P01599 117 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 IGLV1-51P01701 117 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 IGHV3-11P01762 117 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 OR5AL1P0C617 328 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 MED14OSP0DP75 135 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 AMTP48728 403 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 MFAP4P55083 255 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 PSG9Q00887 426 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 MRPL54Q6P161 138 aaKnown RBP6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 C16orf54Q6UWD8 224 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 COX8CQ7Z4L0 72 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 Q8N6K4 173 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 UBE2E2Q96LR5 201 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 ATP6V0BQ99437 205 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 NDFIP1Q9BT67 221 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 NRN1Q9NPD7 142 aa6.31□□□□□ -1.4
SHARPIN-210ENST00000534435 TNCP24821 2201 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 IGLV11-55A0A075B6I3 123 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 LINC01619G3V211 115 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 HSBP1O75506 76 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 NDUFB8O95169 186 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 IGLC2P0DOY2 106 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 RPL7P18124 248 aaKnown RBP6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 PPIFP30405 207 aaKnown RBP6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 CSN1S1P47710 185 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 TCL1AP56279 114 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 LYZP61626 148 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 LINC00322Q6ZN03 302 aaPredicted RBP6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 Q86TA4 180 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 GATD1Q8NB37 220 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 C18orf32Q8TCD1 76 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 VN1R17PQ8TDU5 208 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 BLNKQ8WV28 456 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 RNF125Q96EQ8 232 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 LINC00479Q96M42 142 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 ALKBH7Q9BT30 221 aaPredicted RBP6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 AAMDCQ9H7C9 122 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 SORL1Q92673 2214 aa6.3□□□□□ -1.4
SHARPIN-210ENST00000534435 TRAV34A0A0B4J273 112 aa6.29□□□□□ -1.4
SHARPIN-210ENST00000534435 GNG7O60262 68 aa6.29□□□□□ -1.4
SHARPIN-210ENST00000534435 SLAQ13239 276 aa6.29□□□□□ -1.4
SHARPIN-210ENST00000534435 RIGQ13278 110 aa6.29□□□□□ -1.4
SHARPIN-210ENST00000534435 SAPCD1Q5SSQ6 148 aa6.29□□□□□ -1.4
SHARPIN-210ENST00000534435 CEMP1Q6PRD7 247 aaPredicted RBP6.29□□□□□ -1.4
SHARPIN-210ENST00000534435 DEFB125Q8N687 156 aa6.29□□□□□ -1.4
SHARPIN-210ENST00000534435 HSPG2P98160 4391 aa6.29□□□□□ -1.4
SHARPIN-210ENST00000534435 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.28□□□□□ -1.4
SHARPIN-210ENST00000534435 ATP6V0E1O15342 81 aa6.28□□□□□ -1.4
SHARPIN-210ENST00000534435 CRXO43186 299 aaPredicted RBP6.28□□□□□ -1.4
SHARPIN-210ENST00000534435 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
SHARPIN-210ENST00000534435 IGLV2-11P01706 119 aa6.28□□□□□ -1.4
SHARPIN-210ENST00000534435 IGHV3-48P01763 117 aa6.28□□□□□ -1.4
SHARPIN-210ENST00000534435 HLA-DRB1P01911 266 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms