RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	MAGOHB	Q96A72	148 aa	Known RBP	1.71	□□□□□ -2.14
PICALM-222	ENST00000534375	METTL1	Q9UBP6	276 aa	Known RBP	1.71	□□□□□ -2.14
PICALM-222	ENST00000534375	IBTK	Q9P2D0	1353 aa	Predicted RBP	1.71	□□□□□ -2.14
PICALM-222	ENST00000534375	TRGV2	A0A075B6R0	118 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375		F8W036	122 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	HYPM	O75409	117 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	HIST1H1B	P16401	226 aa	Known RBP	1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	CKS2	P33552	79 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	COPZ1	P61923	177 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	NEDD8	Q15843	81 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	TNS3	Q68CZ2	1445 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	OR5AS1	Q8N127	324 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	LINC00052	Q96N35	136 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	SDF2	Q99470	211 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	LINC00470	Q9BZP3	86 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	SLC35B3	Q9H1N7	401 aa		1.7	□□□□□ -2.14
PICALM-222	ENST00000534375	WDR97	A6NE52	1622 aa		1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	ZNF670-ZNF695	F2Z2N8	137 aa		1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	RPS19BP1	Q86WX3	136 aa	Known RBP	1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	GKN2	Q86XP6	184 aa		1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	KRTAP13-1	Q8IUC0	172 aa		1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	CDC42SE1	Q9NRR8	79 aa		1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	MPC1	Q9Y5U8	109 aa		1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	MED13	Q9UHV7	2174 aa		1.69	□□□□□ -2.14
PICALM-222	ENST00000534375	DLEU1	O43261	78 aa		1.68	□□□□□ -2.14
PICALM-222	ENST00000534375	PITX3	O75364	302 aa		1.68	□□□□□ -2.14
PICALM-222	ENST00000534375	NCR2	O95944	276 aa		1.68	□□□□□ -2.14
PICALM-222	ENST00000534375	LSM3	P62310	102 aa	Known RBP	1.68	□□□□□ -2.14
PICALM-222	ENST00000534375	SELENOW	P63302	87 aa		1.68	□□□□□ -2.14
PICALM-222	ENST00000534375	OR10AC1	Q8NH08	325 aa		1.68	□□□□□ -2.14
PICALM-222	ENST00000534375	SORL1	Q92673	2214 aa		1.68	□□□□□ -2.14
PICALM-222	ENST00000534375	CASZ1	Q86V15	1759 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	KDM6A	O15550	1401 aa	Predicted RBP	1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	FGD6	Q6ZV73	1430 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	IGHV1-24	A0A0C4DH33	117 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375		F8W1H4	67 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	MRPS14	O60783	128 aa	Known RBP	1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	ETV6	P41212	452 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	SPCS2	Q15005	226 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	ASB16-AS1	Q495Z4	193 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	CASC2	Q6XLA1	102 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	C4orf3	Q8WVX3	66 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	CIB3	Q96Q77	187 aa	Predicted RBP	1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	KLK9	Q9UKQ9	250 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	SPEF2	Q9C093	1822 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	CECR2	Q9BXF3	1484 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	ZGRF1	Q86YA3	2104 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	TET1	Q8NFU7	2136 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	HIVEP2	P31629	2446 aa		1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	NCOA6	Q14686	2063 aa	Predicted RBP	1.67	□□□□□ -2.14
PICALM-222	ENST00000534375	ATG2A	Q2TAZ0	1938 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	AKAP11	Q9UKA4	1901 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	TRBV6-4	A0A1B0GX49	114 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	EDF1	O60869	148 aa	Known RBP	1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	IGF2	P01344	180 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	IZUMO2	Q6UXV1	221 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	C5orf17	Q8NAS9	161 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	ARL11	Q969Q4	196 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	ORMDL1	Q9P0S3	153 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	ROCK2	O75116	1388 aa	Known RBP	1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	PTPRG	P23470	1445 aa		1.66	□□□□□ -2.14
PICALM-222	ENST00000534375	ERCC6	Q03468	1493 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	TRBV20-1	A0A075B6N2	111 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	CDC42EP2	O14613	210 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	CCL25	O15444	150 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	COX7C	P15954	63 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	PLGLB1	Q02325	96 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	EMX2	Q04743	252 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	SPRN	Q5BIV9	151 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	OR10AG1	Q8NH19	301 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	C1orf54	Q8WWF1	131 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	C2orf88	Q9BSF0	95 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	CIT	O14578	2027 aa		1.65	□□□□□ -2.15
PICALM-222	ENST00000534375	SNRNP200	O75643	2136 aa	Known RBP	1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	LOC100130705	A0A1B0GUX0	176 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	HCRT	O43612	131 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	NUPR1	O60356	82 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	TPST1	O60507	370 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	IGHV3-33	P01772	117 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	FAM74A1	Q5RGS3	127 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	ZNF563	Q8TA94	476 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	SMIM7	Q9BQ49	75 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	PLXNA2	O75051	1894 aa		1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	FBN1	P35555	2871 aa	Known RBP	1.64	□□□□□ -2.15
PICALM-222	ENST00000534375	PNMA8C	A0A1B0GUJ8	204 aa		1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	IFITM5	A6NNB3	132 aa		1.63	□□□□□ -2.15
PICALM-222	ENST00000534375		M0R2P5	195 aa		1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	ZNF25	P17030	456 aa	Predicted RBP	1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	MIC13	Q5XKP0	118 aa		1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	ZNF431	Q8TF32	576 aa	Predicted RBP	1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	DPH3	Q96FX2	82 aa		1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	LIMD2	Q9BT23	127 aa		1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	ADGRB1	O14514	1584 aa		1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	GRIN2A	Q12879	1464 aa		1.63	□□□□□ -2.15
PICALM-222	ENST00000534375	LRP5	O75197	1615 aa		1.62	□□□□□ -2.15
PICALM-222	ENST00000534375	COL4A1	P02462	1669 aa		1.62	□□□□□ -2.15
PICALM-222	ENST00000534375	LOC110117498	A0A087WWA1	95 aa		1.62	□□□□□ -2.15
PICALM-222	ENST00000534375		A0A0G2JMM0	328 aa		1.62	□□□□□ -2.15
PICALM-222	ENST00000534375		A0A1W2PPB8	328 aa		1.62	□□□□□ -2.15

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