RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 DCANP1Q8TF63 244 aa9.14□□□□□ -0.95
CHRDL2-209ENST00000534276 LINC00477Q96M19 166 aa9.14□□□□□ -0.95
CHRDL2-209ENST00000534276 NDFIP1Q9BT67 221 aa9.14□□□□□ -0.95
CHRDL2-209ENST00000534276 TRAV25A0A0B4J276 109 aa9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 LCE6AA0A183 80 aa9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 C19orf71A6NCJ1 209 aa9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 RPL19P84098 196 aaKnown RBP9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 FAM24BQ8N5W8 94 aa9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 OR4B1Q8NGF8 309 aa9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 RETNQ9HD89 108 aa9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 IL36BQ9NZH7 164 aa9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 V9GYV3 84 aa9.13□□□□□ -0.95
CHRDL2-209ENST00000534276 DNAH7Q8WXX0 4024 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 TRAV8-1A0A0A6YYK1 113 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 NPIPB6E9PJ23 425 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 K7EQG2 157 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 HLA-DMBP28068 263 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 OR5I1Q13606 314 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 DEFB125Q8N687 156 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 DAZAP1Q96EP5 407 aaKnown RBP9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 WFDC10AQ9H1F0 79 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 MS4A6AQ9H2W1 248 aa9.12□□□□□ -0.95
CHRDL2-209ENST00000534276 IGKV2-40A0A087WW87 121 aaPredicted RBP9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 FAM231BA6NCW3 169 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 RBMY1BA6NDE4 496 aaKnown RBP9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 RBMY1EA6NEQ0 496 aaKnown RBP9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 ZNF705FA8MVS1 300 aaPredicted RBP9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 OR11H12B2RN74 326 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 GATCO43716 136 aaKnown RBP9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 IGKV2D-40P01614 121 aaPredicted RBP9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 RBMY1DP0C7P1 496 aaKnown RBP9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 CT45A10P0DMU9 189 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 ZNF138P52744 262 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 IGFL4Q6B9Z1 124 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 RNF182Q8N6D2 247 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 ZNF738Q8NE65 137 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 NUDT10Q8NFP7 164 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 OR10J6PQ8NGY7 276 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 NUDT11Q96G61 164 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 SRD5A3Q9H8P0 318 aa9.11□□□□□ -0.95
CHRDL2-209ENST00000534276 RAB5AP20339 215 aa9.1□□□□□ -0.95
CHRDL2-209ENST00000534276 TMEM61Q8N0U2 210 aa9.1□□□□□ -0.95
CHRDL2-209ENST00000534276 GBGT1Q8N5D6 347 aa9.1□□□□□ -0.95
CHRDL2-209ENST00000534276 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
CHRDL2-209ENST00000534276 VGLL1Q99990 258 aa9.1□□□□□ -0.95
CHRDL2-209ENST00000534276 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
CHRDL2-209ENST00000534276 RNASE7Q9H1E1 156 aaKnown RBP9.1□□□□□ -0.95
CHRDL2-209ENST00000534276 SELENOKQ9Y6D0 94 aa9.1□□□□□ -0.95
CHRDL2-209ENST00000534276 SMIM27A0A1W2PRY6 76 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 ZNF705GA8MUZ8 300 aaPredicted RBP9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 A8MWL6 223 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 PRAC2D3DTV9 90 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 P01737 135 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 TYMSP04818 313 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 SMUG1Q53HV7 270 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 RBPMS2Q6ZRY4 209 aaKnown RBP9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 NHLRC2Q8NBF2 726 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 OR8A1Q8NGG7 326 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 C20orf173Q96LM9 149 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 SPAG8Q99932 426 aaPredicted RBP9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 FAM110AQ9BQ89 295 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 GFRA4Q9GZZ7 299 aa9.09□□□□□ -0.95
CHRDL2-209ENST00000534276 RYR2Q92736 4967 aa9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 COX19Q49B96 90 aa9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 TSKUQ8WUA8 353 aa9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 ZC2HC1AQ96GY0 325 aa9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 FAM210BQ96KR6 192 aa9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 ODF3Q96PU9 254 aa9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 SAV1Q9H4B6 383 aaPredicted RBP9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 RPP21Q9H633 154 aaKnown RBP9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 URGCP-MRPS24S4R325 110 aa9.08□□□□□ -0.96
CHRDL2-209ENST00000534276 FABP5P3A8MUU1 101 aa9.07□□□□□ -0.96
CHRDL2-209ENST00000534276 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
CHRDL2-209ENST00000534276 CMC4P56277 68 aaPredicted RBP9.07□□□□□ -0.96
CHRDL2-209ENST00000534276 FAM162BQ5T6X4 162 aa9.07□□□□□ -0.96
CHRDL2-209ENST00000534276 PRR27Q6MZM9 219 aa9.07□□□□□ -0.96
CHRDL2-209ENST00000534276 IL17DQ8TAD2 202 aa9.07□□□□□ -0.96
CHRDL2-209ENST00000534276 FAM19A4Q96LR4 140 aa9.07□□□□□ -0.96
CHRDL2-209ENST00000534276 SACSQ9NZJ4 4579 aa9.07□□□□□ -0.96
CHRDL2-209ENST00000534276 IGKV3-7A0A075B6H7 116 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 TGIF2-C20orf24A0A0A6YYL0 155 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 XKRY2A2RUG3 117 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 OR4C46A6NHA9 309 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 DUSP14O95147 198 aaKnown RBP9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 CXCL1P09341 107 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 CRISP2P16562 243 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 FAM3BP58499 235 aaPredicted RBP9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 RPS20P60866 119 aaKnown RBP9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 ERCC8Q13216 396 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 RASL11AQ6T310 242 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 APRG1Q8IVJ8 170 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 NAT8BQ9UHF3 227 aa9.06□□□□□ -0.96
CHRDL2-209ENST00000534276 A0A1W2PPQ1 181 aa9.05□□□□□ -0.96
CHRDL2-209ENST00000534276 CRIP1P50238 77 aa9.05□□□□□ -0.96
CHRDL2-209ENST00000534276 Q6AWC8 147 aa9.05□□□□□ -0.96
CHRDL2-209ENST00000534276 EBLN2Q6P2I7 272 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms