RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 C11orf72Q8NBR9 251 aa13.25□□□□□ -0.29
LRRK1-210ENST00000534045 LINC00588Q9Y4M8 146 aa13.25□□□□□ -0.29
LRRK1-210ENST00000534045 LENEPQ9Y5L5 61 aa13.25□□□□□ -0.29
LRRK1-210ENST00000534045 H3BNG1 76 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 MBP02144 154 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 MUC21Q5SSG8 566 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 PRR9Q5T870 116 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 ZNRF2Q8NHG8 242 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 ASB13Q8WXK3 278 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 AQP10Q96PS8 301 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 TP53TG3Q9ULZ0 132 aa13.24□□□□□ -0.29
LRRK1-210ENST00000534045 NBDYA0A0U1RRE5 68 aa13.23□□□□□ -0.29
LRRK1-210ENST00000534045 SPINK4O60575 86 aa13.23□□□□□ -0.29
LRRK1-210ENST00000534045 GIPP09681 153 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-210ENST00000534045 CDC34P49427 236 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-210ENST00000534045 Q9H8V8 135 aa13.23□□□□□ -0.29
LRRK1-210ENST00000534045 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
LRRK1-210ENST00000534045 ARL6IP6Q8N6S5 226 aa13.22□□□□□ -0.29
LRRK1-210ENST00000534045 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
LRRK1-210ENST00000534045 C18orf15Q96N68 181 aa13.22□□□□□ -0.29
LRRK1-210ENST00000534045 PSMG3Q9BT73 122 aaPredicted RBP13.22□□□□□ -0.29
LRRK1-210ENST00000534045 NAGKQ9UJ70 344 aa13.22□□□□□ -0.29
LRRK1-210ENST00000534045 IGHV3-53P01767 116 aa13.21□□□□□ -0.29
LRRK1-210ENST00000534045 ATP6V0CP27449 155 aa13.21□□□□□ -0.29
LRRK1-210ENST00000534045 SERF2P84101 59 aa13.21□□□□□ -0.29
LRRK1-210ENST00000534045 SLAQ13239 276 aa13.21□□□□□ -0.29
LRRK1-210ENST00000534045 Q6ZQT7 251 aa13.21□□□□□ -0.29
LRRK1-210ENST00000534045 MRPL16Q9NX20 251 aaKnown RBP13.21□□□□□ -0.29
LRRK1-210ENST00000534045 TRGV11A0A075B6L2 103 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 FXYD6-FXYD2A0A087WZ82 144 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 BORCS7-ASMTA0A0B4J1R7 106 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 K7EQM0 130 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 PAX4O43316 350 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 ARL14EPLP0DKL9 152 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 OR2G3Q8NGZ4 309 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 RAB24Q969Q5 203 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 ST6GAL2Q96JF0 529 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 NDFIP1Q9BT67 221 aa13.2□□□□□ -0.3
LRRK1-210ENST00000534045 ACTR3CQ9C0K3 210 aaPredicted RBP13.2□□□□□ -0.3
LRRK1-210ENST00000534045 TMEM183BQ1AE95 376 aa13.19□□□□□ -0.3
LRRK1-210ENST00000534045 ESRGQ1W209 222 aa13.19□□□□□ -0.3
LRRK1-210ENST00000534045 Q6AWC8 147 aa13.19□□□□□ -0.3
LRRK1-210ENST00000534045 IQCF2Q8IXL9 164 aa13.19□□□□□ -0.3
LRRK1-210ENST00000534045 TMEM183AQ8IXX5 376 aa13.19□□□□□ -0.3
LRRK1-210ENST00000534045 TREM1Q9NP99 234 aa13.19□□□□□ -0.3
LRRK1-210ENST00000534045 TRAV21A0A0B4J279 112 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 STAG3L2P0CL84 134 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 STAG3L3P0CL85 134 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 RGS21Q2M5E4 152 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 Q5BKY6 102 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 TTC32Q5I0X7 151 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 SPXQ9BT56 116 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 PRO0255Q9UI72 69 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 TNFSF18Q9UNG2 199 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 HHLA3Q9XRX5 114 aa13.18□□□□□ -0.3
LRRK1-210ENST00000534045 TRGV4A0A0C4DH28 118 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 A0A1B0GVY2 172 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 SERTM2A0A1B0GWG4 89 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 CXorf1O96002 111 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 GNG5P63218 68 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 OR2T35Q8NGX2 323 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 VSIG2Q96IQ7 327 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 TMEM167BQ9NRX6 74 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 ICOSQ9Y6W8 199 aa13.17□□□□□ -0.3
LRRK1-210ENST00000534045 GCHFRP30047 84 aa13.16□□□□□ -0.3
LRRK1-210ENST00000534045 C5orf17Q8NAS9 161 aa13.16□□□□□ -0.3
LRRK1-210ENST00000534045 A0A096LPF7 62 aa13.15□□□□□ -0.3
LRRK1-210ENST00000534045 TRAV8-1A0A0A6YYK1 113 aa13.15□□□□□ -0.3
LRRK1-210ENST00000534045 F6UZH7 168 aa13.15□□□□□ -0.3
LRRK1-210ENST00000534045 SUMO1P63165 101 aaKnown RBP13.15□□□□□ -0.3
LRRK1-210ENST00000534045 KCNS1Q96KK3 526 aa13.15□□□□□ -0.3
LRRK1-210ENST00000534045 SGK494Q96LW2 274 aa13.15□□□□□ -0.3
LRRK1-210ENST00000534045 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
LRRK1-210ENST00000534045 SH3BGRL3Q9H299 93 aa13.15□□□□□ -0.3
LRRK1-210ENST00000534045 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.3
LRRK1-210ENST00000534045 MUC4Q99102 2169 aa13.15□□□□□ -0.3
LRRK1-210ENST00000534045 MRPL23Q16540 153 aaKnown RBP13.14□□□□□ -0.31
LRRK1-210ENST00000534045 RPL7L1Q6DKI1 246 aaKnown RBP13.14□□□□□ -0.31
LRRK1-210ENST00000534045 UPK3BQ9BT76 320 aa13.14□□□□□ -0.31
LRRK1-210ENST00000534045 SDF2L1Q9HCN8 221 aa13.14□□□□□ -0.31
LRRK1-210ENST00000534045 GNRH2O43555 120 aa13.13□□□□□ -0.31
LRRK1-210ENST00000534045 TCRAP04437 139 aa13.13□□□□□ -0.31
LRRK1-210ENST00000534045 TDRG1Q3Y452 100 aa13.13□□□□□ -0.31
LRRK1-210ENST00000534045 ZFP69Q49AA0 526 aa13.13□□□□□ -0.31
LRRK1-210ENST00000534045 PCNPQ8WW12 178 aaKnown RBP13.13□□□□□ -0.31
LRRK1-210ENST00000534045 DNAH2Q9P225 4427 aa13.12□□□□□ -0.31
LRRK1-210ENST00000534045 CRYBA4P53673 196 aa13.12□□□□□ -0.31
LRRK1-210ENST00000534045 FHL2Q14192 279 aa13.12□□□□□ -0.31
LRRK1-210ENST00000534045 AKR1C8PQ5T2L2 129 aa13.12□□□□□ -0.31
LRRK1-210ENST00000534045 RASL10AQ92737 203 aa13.12□□□□□ -0.31
LRRK1-210ENST00000534045 EPDR1Q9UM22 224 aa13.12□□□□□ -0.31
LRRK1-210ENST00000534045 HECTD4Q9Y4D8 3996 aa13.12□□□□□ -0.31
LRRK1-210ENST00000534045 RNF222A6NCQ9 220 aa13.11□□□□□ -0.31
LRRK1-210ENST00000534045 M0R2P5 195 aa13.11□□□□□ -0.31
LRRK1-210ENST00000534045 TAAR5O14804 337 aa13.11□□□□□ -0.31
LRRK1-210ENST00000534045 IFNA7P01567 189 aa13.11□□□□□ -0.31
LRRK1-210ENST00000534045 SFTA3P0C7M3 94 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms