RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 NDFIP1Q9BT67 221 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 RNASE7Q9H1E1 156 aaKnown RBP10.57□□□□□ -0.72
TRIM3-212ENST00000533064 PSG8Q9UQ74 426 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 V9GYV3 84 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 ERCC8Q13216 396 aa10.56□□□□□ -0.72
TRIM3-212ENST00000533064 GDF5OSQ5U4N7 250 aa10.56□□□□□ -0.72
TRIM3-212ENST00000533064 STHQ8IWL8 128 aa10.56□□□□□ -0.72
TRIM3-212ENST00000533064 OR4B1Q8NGF8 309 aa10.56□□□□□ -0.72
TRIM3-212ENST00000533064 FAM210BQ96KR6 192 aa10.56□□□□□ -0.72
TRIM3-212ENST00000533064 MGAM2Q2M2H8 2515 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 NPIPB6E9PJ23 425 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 G3V4G9 280 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 ZNF138P52744 262 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 EGFEM1PQ0D2K5 195 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 BTF3L4Q96K17 158 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 AGPAT4-IT1Q9H0P7 198 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 IL36BQ9NZH7 164 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 NOTCH1P46531 2555 aa10.55□□□□□ -0.72
TRIM3-212ENST00000533064 ZNF124Q15973 351 aa10.54□□□□□ -0.72
TRIM3-212ENST00000533064 TRAV9-1A0A075B6T8 112 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 ZNF705GA8MUZ8 300 aaPredicted RBP10.53□□□□□ -0.72
TRIM3-212ENST00000533064 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 PRR27Q6MZM9 219 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 NUDT10Q8NFP7 164 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 Q8TAT8 98 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 NUDT11Q96G61 164 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 PRR25Q96S07 402 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 C19orf73Q9NVV2 129 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 LENEPQ9Y5L5 61 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 NBEAL1Q6ZS30 2694 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 H3BMM0 161 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 GATCO43716 136 aaKnown RBP10.53□□□□□ -0.72
TRIM3-212ENST00000533064 IGKV3-20P01619 116 aa10.53□□□□□ -0.72
TRIM3-212ENST00000533064 RPS10P46783 165 aaKnown RBP10.53□□□□□ -0.72
TRIM3-212ENST00000533064 FAM3BP58499 235 aaPredicted RBP10.53□□□□□ -0.72
TRIM3-212ENST00000533064 C19orf71A6NCJ1 209 aa10.52□□□□□ -0.73
TRIM3-212ENST00000533064 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
TRIM3-212ENST00000533064 COX8CQ7Z4L0 72 aa10.52□□□□□ -0.73
TRIM3-212ENST00000533064 DEFB125Q8N687 156 aa10.52□□□□□ -0.73
TRIM3-212ENST00000533064 ODF3Q96PU9 254 aa10.52□□□□□ -0.73
TRIM3-212ENST00000533064 WFDC10AQ9H1F0 79 aa10.52□□□□□ -0.73
TRIM3-212ENST00000533064 TRBV7-9A0A0J9YWB2 115 aa10.51□□□□□ -0.73
TRIM3-212ENST00000533064 TYMSP04818 313 aa10.51□□□□□ -0.73
TRIM3-212ENST00000533064 CT45A10P0DMU9 189 aa10.51□□□□□ -0.73
TRIM3-212ENST00000533064 TSPOP30536 169 aa10.51□□□□□ -0.73
TRIM3-212ENST00000533064 LEPP41159 167 aa10.51□□□□□ -0.73
TRIM3-212ENST00000533064 KRTAP10-11P60412 298 aa10.51□□□□□ -0.73
TRIM3-212ENST00000533064 NUTF2P61970 127 aaKnown RBP10.51□□□□□ -0.73
TRIM3-212ENST00000533064 DAZAP1Q96EP5 407 aaKnown RBP10.51□□□□□ -0.73
TRIM3-212ENST00000533064 ZC2HC1AQ96GY0 325 aa10.51□□□□□ -0.73
TRIM3-212ENST00000533064 SMIM27A0A1W2PRY6 76 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 P01737 135 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 RAB5BP61020 215 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 CT83Q5H943 113 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 LINC00322Q6ZN03 302 aaPredicted RBP10.5□□□□□ -0.73
TRIM3-212ENST00000533064 CLUHP3Q96NS8 147 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 SRD5A3Q9H8P0 318 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 A8MTW9 85 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 GPX1P07203 203 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 TRPT1Q86TN4 253 aaKnown RBP10.5□□□□□ -0.73
TRIM3-212ENST00000533064 Q8N1Y9 231 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 C8orf49Q96NF6 230 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 ASCL2Q99929 193 aa10.5□□□□□ -0.73
TRIM3-212ENST00000533064 RPP21Q9H633 154 aaKnown RBP10.5□□□□□ -0.73
TRIM3-212ENST00000533064 CDKN1BP46527 198 aa10.49□□□□□ -0.73
TRIM3-212ENST00000533064 A8MWL6 223 aa10.48□□□□□ -0.73
TRIM3-212ENST00000533064 J3KRW8 73 aa10.48□□□□□ -0.73
TRIM3-212ENST00000533064 CA1P00915 261 aaPredicted RBP10.48□□□□□ -0.73
TRIM3-212ENST00000533064 CRISP2P16562 243 aa10.48□□□□□ -0.73
TRIM3-212ENST00000533064 S100A12P80511 92 aa10.48□□□□□ -0.73
TRIM3-212ENST00000533064 RPL19P84098 196 aaKnown RBP10.48□□□□□ -0.73
TRIM3-212ENST00000533064 TSKUQ8WUA8 353 aa10.48□□□□□ -0.73
TRIM3-212ENST00000533064 M0R2Z0 102 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 AMBPP02760 352 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 RPL35AP18077 110 aaKnown RBP10.47□□□□□ -0.73
TRIM3-212ENST00000533064 SPINK13Q1W4C9 94 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 AMTNQ6UX39 209 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 FAM19A4Q96LR4 140 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 TRGC2P03986 189 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 CRIP1P50238 77 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 FAM162BQ5T6X4 162 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
TRIM3-212ENST00000533064 ZFP82Q8N141 532 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 LINC00469Q8N7U9 141 aa10.47□□□□□ -0.73
TRIM3-212ENST00000533064 DNAH3Q8TD57 4116 aa10.46□□□□□ -0.73
TRIM3-212ENST00000533064 LOC102724200A0A096LPH7 203 aaPredicted RBP10.46□□□□□ -0.74
TRIM3-212ENST00000533064 FAM231BA6NCW3 169 aa10.46□□□□□ -0.74
TRIM3-212ENST00000533064 RBMY1BA6NDE4 496 aaKnown RBP10.46□□□□□ -0.74
TRIM3-212ENST00000533064 RBMY1EA6NEQ0 496 aaKnown RBP10.46□□□□□ -0.74
TRIM3-212ENST00000533064 RBMY1DP0C7P1 496 aaKnown RBP10.46□□□□□ -0.74
TRIM3-212ENST00000533064 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.74
TRIM3-212ENST00000533064 TCL1AP56279 114 aa10.46□□□□□ -0.74
TRIM3-212ENST00000533064 FXYD7P58549 80 aa10.46□□□□□ -0.74
TRIM3-212ENST00000533064 KPRPQ5T749 579 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms