RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 SPRY4Q9C004 299 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 NLRC5Q86WI3 1866 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 TRBV19A0A075B6N1 114 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 TMEM243Q9BU79 118 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 INS-IGF2F8WCM5 200 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 H3BRN7 92 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.52□□□□□ -1.05
COLCA1-203ENST00000532918 MLANAQ16655 118 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 C9orf118A6NHY6 69 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 KLK9Q9UKQ9 250 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 SNHG12Q9BXW3 62 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 ZNF492Q9P255 531 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 CTSZQ9UBR2 303 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
COLCA1-203ENST00000532918 I3L3M4 83 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 IGHV4-38-2P0DP08 117 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 LOXL1Q08397 574 aaPredicted RBP8.51□□□□□ -1.05
COLCA1-203ENST00000532918 ZC2HC1BQ5TFG8 222 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 NKAPP1Q8N9T2 125 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 DOCK8Q8NF50 2099 aa8.51□□□□□ -1.05
COLCA1-203ENST00000532918 TMEM89A2RUT3 159 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 HAMPP81172 84 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 RHOHQ15669 191 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 GBF1Q92538 1859 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 A0A0G2JRQ6 117 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 K7EP34 96 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 RNF152Q8N8N0 203 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 RNF138Q8WVD3 245 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 FANCMQ8IYD8 2048 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 Q6ZRM9 215 aa8.5□□□□□ -1.05
COLCA1-203ENST00000532918 J3KT08 172 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 CCL18P55774 89 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 THAP8Q8NA92 274 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 PRB4P10163 310 aaPredicted RBP8.49□□□□□ -1.05
COLCA1-203ENST00000532918 PRIMA1Q86XR5 153 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 PIFOQ8TCI5 191 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 PLXNA2O75051 1894 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 USF3Q68DE3 2245 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 SPART-AS1P0CW21 52 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 INSL3P51460 131 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 ZNF134P52741 427 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 NPBQ8NG41 125 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 IGF2BP2-AS1Q96M15 143 aa8.49□□□□□ -1.05
COLCA1-203ENST00000532918 LHBP01229 141 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 NUP35Q8NFH5 326 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 MUC6Q6W4X9 2439 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 MMP23AO75900 390 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 ZNRF2Q8NHG8 242 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 MRPL53Q96EL3 112 aaKnown RBP8.48□□□□□ -1.05
COLCA1-203ENST00000532918 PYGO2Q9BRQ0 406 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 WT1-ASQ06250 92 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 PRSS57Q6UWY2 283 aa8.48□□□□□ -1.05
COLCA1-203ENST00000532918 TRAV25A0A0B4J276 109 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 PRSS46E5RG02 174 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 NRGNQ92686 78 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 CYTL1Q9NRR1 136 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 POLR3KQ9Y2Y1 108 aaPredicted RBP8.47□□□□□ -1.05
COLCA1-203ENST00000532918 PTPRDP23468 1912 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 IGLV3-1P01715 115 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 LYL1P12980 280 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 ZNF493Q6ZR52 646 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 RSPO1Q2MKA7 263 aaPredicted RBP8.47□□□□□ -1.05
COLCA1-203ENST00000532918 SMAD5-AS1Q9Y6J3 95 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 MED12Q93074 2177 aa8.47□□□□□ -1.05
COLCA1-203ENST00000532918 TRAV12-2A0A075B6T6 113 aa8.46□□□□□ -1.05
COLCA1-203ENST00000532918 IGLC1P0CG04 106 aa8.46□□□□□ -1.05
COLCA1-203ENST00000532918 ANXA2RQ3ZCQ2 193 aa8.46□□□□□ -1.05
COLCA1-203ENST00000532918 Q8NA96 180 aa8.46□□□□□ -1.05
COLCA1-203ENST00000532918 C15orf53Q8NAA6 179 aa8.46□□□□□ -1.05
COLCA1-203ENST00000532918 C16orf74Q96GX8 76 aa8.46□□□□□ -1.05
COLCA1-203ENST00000532918 IGHV1-24A0A0C4DH33 117 aa8.46□□□□□ -1.06
COLCA1-203ENST00000532918 A0A1W2PNU3 283 aaPredicted RBP8.46□□□□□ -1.06
COLCA1-203ENST00000532918 DIAPH2-AS1Q14236 149 aa8.46□□□□□ -1.06
COLCA1-203ENST00000532918 WIPF2Q8TF74 440 aaPredicted RBP8.46□□□□□ -1.06
COLCA1-203ENST00000532918 ATP5G1P05496 136 aa8.46□□□□□ -1.06
COLCA1-203ENST00000532918 CRYBA4P53673 196 aa8.46□□□□□ -1.06
COLCA1-203ENST00000532918 Q8NFD4 153 aa8.46□□□□□ -1.06
COLCA1-203ENST00000532918 C11orf53Q8IXP5 236 aa8.45□□□□□ -1.06
COLCA1-203ENST00000532918 PRR25Q96S07 402 aa8.45□□□□□ -1.06
COLCA1-203ENST00000532918 SPANXB1Q9NS25 103 aaPredicted RBP8.45□□□□□ -1.06
COLCA1-203ENST00000532918 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
COLCA1-203ENST00000532918 ICOSQ9Y6W8 199 aa8.45□□□□□ -1.06
COLCA1-203ENST00000532918 FER1L5A0AVI2 2057 aa8.45□□□□□ -1.06
COLCA1-203ENST00000532918 SLURP1P55000 103 aa8.45□□□□□ -1.06
COLCA1-203ENST00000532918 MRPL23Q16540 153 aaKnown RBP8.45□□□□□ -1.06
COLCA1-203ENST00000532918 ANGP03950 147 aaKnown RBP8.45□□□□□ -1.06
COLCA1-203ENST00000532918 C1orf147Q96MC9 270 aaPredicted RBP8.45□□□□□ -1.06
COLCA1-203ENST00000532918 ANAPC1Q9H1A4 1944 aa8.45□□□□□ -1.06
COLCA1-203ENST00000532918 POLEQ07864 2286 aa8.45□□□□□ -1.06
COLCA1-203ENST00000532918 DEFB136Q30KP8 78 aa8.44□□□□□ -1.06
COLCA1-203ENST00000532918 AMN1Q8IY45 258 aa8.44□□□□□ -1.06
COLCA1-203ENST00000532918 ZNF843Q8N446 348 aa8.44□□□□□ -1.06
COLCA1-203ENST00000532918 C4orf3Q8WVX3 66 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms