RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
PCDHA9-202ENST00000532602 PTPRQQ9UMZ3 2332 aa11.72□□□□□ -0.53
PCDHA9-202ENST00000532602 C2orf66Q6UXQ4 117 aa11.72□□□□□ -0.53
PCDHA9-202ENST00000532602 KIAA1549LQ6ZVL6 1849 aa11.72□□□□□ -0.53
PCDHA9-202ENST00000532602 CGB3P0DN86 165 aa11.72□□□□□ -0.53
PCDHA9-202ENST00000532602 POU2AF1Q16633 256 aa11.71□□□□□ -0.53
PCDHA9-202ENST00000532602 FAM104BQ5XKR9 115 aa11.71□□□□□ -0.53
PCDHA9-202ENST00000532602 SDHAF1A6NFY7 115 aa11.71□□□□□ -0.53
PCDHA9-202ENST00000532602 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
PCDHA9-202ENST00000532602 C11orf53Q8IXP5 236 aa11.71□□□□□ -0.53
PCDHA9-202ENST00000532602 C3orf79P0CE67 100 aa11.71□□□□□ -0.54
PCDHA9-202ENST00000532602 ESDP10768 282 aa11.71□□□□□ -0.54
PCDHA9-202ENST00000532602 ANXA2RQ3ZCQ2 193 aa11.71□□□□□ -0.54
PCDHA9-202ENST00000532602 FOXI2Q6ZQN5 318 aa11.71□□□□□ -0.54
PCDHA9-202ENST00000532602 VWC2LB2RUY7 222 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 IGLC1P0CG04 106 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 Q8N8P6 123 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 THAP8Q8NA92 274 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 PMVKQ15126 192 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 MED13LQ71F56 2210 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 CCL24O00175 119 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 C9orf66Q5T8R8 295 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 TMEM126AQ9H061 195 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 TMEM213A2RRL7 107 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 C2orf82Q6UX34 121 aa11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 FGF23Q9GZV9 251 aaPredicted RBP11.7□□□□□ -0.54
PCDHA9-202ENST00000532602 MALRD1Q5VYJ5 2156 aa11.69□□□□□ -0.54
PCDHA9-202ENST00000532602 CGB7P0DN87 165 aa11.69□□□□□ -0.54
PCDHA9-202ENST00000532602 TMEM256Q8N2U0 113 aa11.69□□□□□ -0.54
PCDHA9-202ENST00000532602 ZGRF1Q86YA3 2104 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 TEX48A0A1B0GUV7 120 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 OR11H6Q8NGC7 330 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 RPL32P62910 135 aaKnown RBP11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 RHOHQ15669 191 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 HOXD3P31249 432 aaPredicted RBP11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 FOXE3Q13461 319 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 RITA1Q96K30 269 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 GAGE6Q13070 117 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 PKIGQ9Y2B9 76 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 SEM1Q6ZVN7 128 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 FAM231DQ6ZW35 169 aa11.68□□□□□ -0.54
PCDHA9-202ENST00000532602 A0A096LPF7 62 aa11.67□□□□□ -0.54
PCDHA9-202ENST00000532602 hDV102S1A0JD36 115 aa11.67□□□□□ -0.54
PCDHA9-202ENST00000532602 PCNX2A6NKB5 2137 aa11.67□□□□□ -0.54
PCDHA9-202ENST00000532602 IGLV3-1P01715 115 aa11.67□□□□□ -0.54
PCDHA9-202ENST00000532602 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
PCDHA9-202ENST00000532602 CYYR1Q96J86 154 aa11.67□□□□□ -0.54
PCDHA9-202ENST00000532602 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
PCDHA9-202ENST00000532602 SPAG8Q99932 426 aaPredicted RBP11.67□□□□□ -0.54
PCDHA9-202ENST00000532602 KLF5Q13887 457 aaPredicted RBP11.66□□□□□ -0.54
PCDHA9-202ENST00000532602 PYGO2Q9BRQ0 406 aa11.66□□□□□ -0.54
PCDHA9-202ENST00000532602 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
PCDHA9-202ENST00000532602 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
PCDHA9-202ENST00000532602 WIPF3A6NGB9 483 aa11.66□□□□□ -0.54
PCDHA9-202ENST00000532602 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
PCDHA9-202ENST00000532602 ZNF114Q8NC26 417 aa11.66□□□□□ -0.54
PCDHA9-202ENST00000532602 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 HIST1H4AP62805 103 aaKnown RBP11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 Q0VG73 95 aa11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 MRPL53Q96EL3 112 aaKnown RBP11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 GTF3C1Q12789 2109 aa11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 IGHV3-38A0A0C4DH36 116 aa11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 PFN2P35080 140 aa11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 DAZAP2Q15038 168 aaPredicted RBP11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 KMT2EQ8IZD2 1858 aa11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 LENEPQ9Y5L5 61 aa11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 TRAV26-2A0A0B4J265 109 aa11.65□□□□□ -0.54
PCDHA9-202ENST00000532602 ZNF491Q8N8L2 437 aa11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 IGHV1-24A0A0C4DH33 117 aa11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 H3BMM0 161 aa11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 LURAP1LQ8IV03 231 aa11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 C10orf105Q8TEF2 133 aa11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 ZNF106Q9H2Y7 1883 aaKnown RBP11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 PCP4P48539 62 aa11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 HLA-DMBP28068 263 aa11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 NCKAP5O14513 1909 aa11.64□□□□□ -0.55
PCDHA9-202ENST00000532602 C17orf77Q96MU5 243 aa11.63□□□□□ -0.55
PCDHA9-202ENST00000532602 TECTAO75443 2155 aa11.63□□□□□ -0.55
PCDHA9-202ENST00000532602 SLURP1P55000 103 aa11.63□□□□□ -0.55
PCDHA9-202ENST00000532602 GAGE2EQ4V326 116 aa11.63□□□□□ -0.55
PCDHA9-202ENST00000532602 GAGE2DQ9UEU5 116 aa11.63□□□□□ -0.55
PCDHA9-202ENST00000532602 LHBP01229 141 aa11.63□□□□□ -0.55
PCDHA9-202ENST00000532602 SPRY4Q9C004 299 aa11.63□□□□□ -0.55
PCDHA9-202ENST00000532602 Q8NA96 180 aa11.63□□□□□ -0.55
PCDHA9-202ENST00000532602 HERVK_113P63121 156 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 RNF152Q8N8N0 203 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 Q8NFD4 153 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 TMEM131Q92545 1883 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 A8MWP6 167 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 F6UB75 175 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 GAGE2BQ13066 116 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 ZNF726P1Q15940 193 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 SMIM2Q9BVW6 85 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 A0A087X0K7 114 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 MRPL51Q4U2R6 128 aaKnown RBP11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 C20orf78Q9BR46 151 aa11.62□□□□□ -0.55
PCDHA9-202ENST00000532602 PRO3102Q9H379 93 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms