RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 RPH3ALQ9UNE2 315 aa12.04□□□□□ -0.48
PHRF1-204ENST00000532550 KLF12Q9Y4X4 402 aa12.04□□□□□ -0.48
PHRF1-204ENST00000532550 LENEPQ9Y5L5 61 aa12.04□□□□□ -0.48
PHRF1-204ENST00000532550 MBP02144 154 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 ATP6V0CP27449 155 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 CDC34P49427 236 aaPredicted RBP12.03□□□□□ -0.48
PHRF1-204ENST00000532550 TCL1AP56279 114 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 SERF2P84101 59 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 SOHLH1Q5JUK2 328 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 ARL6IP6Q8N6S5 226 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 TMED6Q8WW62 240 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 DNAH2Q9P225 4427 aa12.03□□□□□ -0.48
PHRF1-204ENST00000532550 PRSS29PA6NIE9 313 aa12.02□□□□□ -0.49
PHRF1-204ENST00000532550 RTL8CO15255 209 aa12.02□□□□□ -0.49
PHRF1-204ENST00000532550 SPINK4O60575 86 aa12.02□□□□□ -0.49
PHRF1-204ENST00000532550 RGS21Q2M5E4 152 aa12.02□□□□□ -0.49
PHRF1-204ENST00000532550 C18orf15Q96N68 181 aa12.02□□□□□ -0.49
PHRF1-204ENST00000532550 LINC00588Q9Y4M8 146 aa12.02□□□□□ -0.49
PHRF1-204ENST00000532550 FXYD6-FXYD2A0A087WZ82 144 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 H3BNG1 76 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 STAG3L2P0CL84 134 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 STAG3L3P0CL85 134 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 ARL14EPLP0DKL9 152 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 MUC21Q5SSG8 566 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 C1orf134Q5TEV5 83 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 GOLT1AQ6ZVE7 132 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 SSX7Q7RTT5 188 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 RAB24Q969Q5 203 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 MUC4Q99102 2169 aa12.01□□□□□ -0.49
PHRF1-204ENST00000532550 BORCS7-ASMTA0A0B4J1R7 106 aa12□□□□□ -0.49
PHRF1-204ENST00000532550 ZNF415Q09FC8 603 aa12□□□□□ -0.49
PHRF1-204ENST00000532550 Q6AWC8 147 aa12□□□□□ -0.49
PHRF1-204ENST00000532550 FAM159AQ6UWV7 190 aa12□□□□□ -0.49
PHRF1-204ENST00000532550 OR2T35Q8NGX2 323 aa12□□□□□ -0.49
PHRF1-204ENST00000532550 ZNRF2Q8NHG8 242 aa12□□□□□ -0.49
PHRF1-204ENST00000532550 ACTR3CQ9C0K3 210 aaPredicted RBP12□□□□□ -0.49
PHRF1-204ENST00000532550 TNFSF18Q9UNG2 199 aa12□□□□□ -0.49
PHRF1-204ENST00000532550 DNAH17Q9UFH2 4485 aa12□□□□□ -0.49
PHRF1-204ENST00000532550 ST6GAL2Q96JF0 529 aa11.99□□□□□ -0.49
PHRF1-204ENST00000532550 NBDYA0A0U1RRE5 68 aa11.98□□□□□ -0.49
PHRF1-204ENST00000532550 GCHFRP30047 84 aa11.98□□□□□ -0.49
PHRF1-204ENST00000532550 RPL7L1Q6DKI1 246 aaKnown RBP11.98□□□□□ -0.49
PHRF1-204ENST00000532550 SH3BGRL3Q9H299 93 aa11.98□□□□□ -0.49
PHRF1-204ENST00000532550 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
PHRF1-204ENST00000532550 HECTD4Q9Y4D8 3996 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 TRGV11A0A075B6L2 103 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 RNF222A6NCQ9 220 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 CXorf1O96002 111 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 GNG5P63218 68 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 TMEM183BQ1AE95 376 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 TMEM183AQ8IXX5 376 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 VSIG2Q96IQ7 327 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 SPXQ9BT56 116 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 Q9H8V8 135 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 TREM1Q9NP99 234 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 NAGKQ9UJ70 344 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
PHRF1-204ENST00000532550 TRAV8-1A0A0A6YYK1 113 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 TRAV21A0A0B4J279 112 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 A0A1B0GVY2 172 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 SERTM2A0A1B0GWG4 89 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 K7EQM0 130 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 IGHV3-53P01767 116 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 SUMO1P63165 101 aaKnown RBP11.96□□□□□ -0.49
PHRF1-204ENST00000532550 SLAQ13239 276 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 ESRGQ1W209 222 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 C5orf17Q8NAS9 161 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 SUN5Q8TC36 379 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 NDFIP1Q9BT67 221 aa11.96□□□□□ -0.49
PHRF1-204ENST00000532550 PAX4O43316 350 aa11.95□□□□□ -0.5
PHRF1-204ENST00000532550 IQCF2Q8IXL9 164 aa11.95□□□□□ -0.5
PHRF1-204ENST00000532550 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
PHRF1-204ENST00000532550 SGK494Q96LW2 274 aa11.95□□□□□ -0.5
PHRF1-204ENST00000532550 A0A096LPF7 62 aa11.94□□□□□ -0.5
PHRF1-204ENST00000532550 TAAR5O14804 337 aa11.94□□□□□ -0.5
PHRF1-204ENST00000532550 TCRAP04437 139 aa11.94□□□□□ -0.5
PHRF1-204ENST00000532550 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
PHRF1-204ENST00000532550 PRO0255Q9UI72 69 aa11.94□□□□□ -0.5
PHRF1-204ENST00000532550 HHLA3Q9XRX5 114 aa11.94□□□□□ -0.5
PHRF1-204ENST00000532550 F6UZH7 168 aa11.93□□□□□ -0.5
PHRF1-204ENST00000532550 GNRH2O43555 120 aa11.93□□□□□ -0.5
PHRF1-204ENST00000532550 C6orf223Q8N319 242 aa11.93□□□□□ -0.5
PHRF1-204ENST00000532550 RASL10AQ92737 203 aa11.93□□□□□ -0.5
PHRF1-204ENST00000532550 KCNS1Q96KK3 526 aa11.93□□□□□ -0.5
PHRF1-204ENST00000532550 EPDR1Q9UM22 224 aa11.93□□□□□ -0.5
PHRF1-204ENST00000532550 TRGV4A0A0C4DH28 118 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 ARPC5O15511 151 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 FHL2Q14192 279 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 AKR1C8PQ5T2L2 129 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 C8orf49Q96NF6 230 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 UPK3BQ9BT76 320 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 SDF2L1Q9HCN8 221 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 PSG8Q9UQ74 426 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 MRPS16Q9Y3D3 137 aaKnown RBP11.92□□□□□ -0.5
PHRF1-204ENST00000532550 ICOSQ9Y6W8 199 aa11.92□□□□□ -0.5
PHRF1-204ENST00000532550 A0A1W2PRE2 83 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms