RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CCDC28AQ8IWP9 274 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 CYB561D1Q8N8Q1 229 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 Q8NAQ8 132 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 C20orf144Q9BQM9 153 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 C11orf68Q9H3H3 251 aaKnown RBP10.47□□□□□ -0.73
CPSF1-206ENST00000531480 ZNF492Q9P255 531 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 NAT8Q9UHE5 227 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 CARHSP1Q9Y2V2 147 aaKnown RBP10.47□□□□□ -0.73
CPSF1-206ENST00000531480 YTHDF2Q9Y5A9 579 aaKnown RBP10.47□□□□□ -0.73
CPSF1-206ENST00000531480 LENEPQ9Y5L5 61 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 LY96Q9Y6Y9 160 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 PEX7O00628 323 aa10.46□□□□□ -0.73
CPSF1-206ENST00000531480 APOC3P02656 99 aa10.46□□□□□ -0.73
CPSF1-206ENST00000531480 MIFP14174 115 aa10.46□□□□□ -0.73
CPSF1-206ENST00000531480 TSPOP30536 169 aa10.46□□□□□ -0.73
CPSF1-206ENST00000531480 C10orf91Q5T1B1 145 aa10.46□□□□□ -0.73
CPSF1-206ENST00000531480 TVP23CQ96ET8 276 aa10.46□□□□□ -0.73
CPSF1-206ENST00000531480 FMC1Q96HJ9 113 aa10.46□□□□□ -0.73
CPSF1-206ENST00000531480 RYR3Q15413 4870 aa10.46□□□□□ -0.74
CPSF1-206ENST00000531480 SMIM9A6NGZ8 99 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 INSP01308 110 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 TCRAP04437 139 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 RBMY1A1P0DJD3 496 aaKnown RBP10.45□□□□□ -0.74
CPSF1-206ENST00000531480 RBMY1CP0DJD4 496 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 LEPP41159 167 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 ATP5G3P48201 142 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 GNG4P50150 75 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 ZNF138P52744 262 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 SRSF3P84103 164 aaKnown RBP10.45□□□□□ -0.74
CPSF1-206ENST00000531480 KIR3DS1Q14943 382 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 RBMY1FQ15415 496 aaKnown RBP10.45□□□□□ -0.74
CPSF1-206ENST00000531480 TMEM78Q5T7P6 136 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 TMEM256Q8N2U0 113 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 ZFAND2AQ8N6M9 145 aa10.45□□□□□ -0.74
CPSF1-206ENST00000531480 TRAV12-2A0A075B6T6 113 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 C9JCJ5 164 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 M0R036 132 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 GNG5P63218 68 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 RHEBQ15382 184 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 ZNF674Q2M3X9 581 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 GFI1BQ5VTD9 330 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 NDFIP1Q9BT67 221 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 PARLQ9H300 379 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 ZFP30Q9Y2G7 519 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 GOLT1BQ9Y3E0 138 aa10.44□□□□□ -0.74
CPSF1-206ENST00000531480 CSMD3Q7Z407 3707 aa10.43□□□□□ -0.74
CPSF1-206ENST00000531480 A0A0J9YWU9 116 aa10.43□□□□□ -0.74
CPSF1-206ENST00000531480 PPP1R2P9O14990 202 aa10.43□□□□□ -0.74
CPSF1-206ENST00000531480 IGLV2-11P01706 119 aa10.43□□□□□ -0.74
CPSF1-206ENST00000531480 SAPCD1Q5SSQ6 148 aa10.43□□□□□ -0.74
CPSF1-206ENST00000531480 GOLT1AQ6ZVE7 132 aa10.43□□□□□ -0.74
CPSF1-206ENST00000531480 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
CPSF1-206ENST00000531480 TRBV6-1A0A0K0K1D8 114 aa10.42□□□□□ -0.74
CPSF1-206ENST00000531480 SCO2A0A1W2PP80 73 aa10.42□□□□□ -0.74
CPSF1-206ENST00000531480 ZNF324O75467 553 aaPredicted RBP10.42□□□□□ -0.74
CPSF1-206ENST00000531480 MT-ND4LP03901 98 aa10.42□□□□□ -0.74
CPSF1-206ENST00000531480 RPL35P42766 123 aaKnown RBP10.42□□□□□ -0.74
CPSF1-206ENST00000531480 TMEM183BQ1AE95 376 aa10.42□□□□□ -0.74
CPSF1-206ENST00000531480 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
CPSF1-206ENST00000531480 Q8TAT8 98 aa10.42□□□□□ -0.74
CPSF1-206ENST00000531480 KLF12Q9Y4X4 402 aa10.42□□□□□ -0.74
CPSF1-206ENST00000531480 TRAV8-1A0A0A6YYK1 113 aa10.41□□□□□ -0.74
CPSF1-206ENST00000531480 C7orf71A4D174 169 aa10.41□□□□□ -0.74
CPSF1-206ENST00000531480 C9JQL5 133 aa10.41□□□□□ -0.74
CPSF1-206ENST00000531480 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
CPSF1-206ENST00000531480 PRR9Q5T870 116 aa10.41□□□□□ -0.74
CPSF1-206ENST00000531480 BAGE2Q86Y30 109 aa10.41□□□□□ -0.74
CPSF1-206ENST00000531480 LINC00467Q9BRT7 94 aa10.41□□□□□ -0.74
CPSF1-206ENST00000531480 CTDSP1Q9GZU7 261 aa10.41□□□□□ -0.74
CPSF1-206ENST00000531480 H7BYZ3 331 aa10.4□□□□□ -0.74
CPSF1-206ENST00000531480 C15orf54Q8N8G6 183 aa10.4□□□□□ -0.74
CPSF1-206ENST00000531480 C2CD4CQ8TF44 421 aa10.4□□□□□ -0.74
CPSF1-206ENST00000531480 ANAPC16Q96DE5 110 aa10.4□□□□□ -0.74
CPSF1-206ENST00000531480 BTF3L4Q96K17 158 aa10.4□□□□□ -0.74
CPSF1-206ENST00000531480 RPH3ALQ9UNE2 315 aa10.4□□□□□ -0.74
CPSF1-206ENST00000531480 PLAC8L1A1L4L8 177 aa10.39□□□□□ -0.75
CPSF1-206ENST00000531480 TMEM189A5PLL7 270 aa10.39□□□□□ -0.75
CPSF1-206ENST00000531480 GPX1P07203 203 aa10.39□□□□□ -0.75
CPSF1-206ENST00000531480 Q6AWC8 147 aa10.39□□□□□ -0.75
CPSF1-206ENST00000531480 CLRN3Q8NCR9 226 aa10.39□□□□□ -0.75
CPSF1-206ENST00000531480 IL17DQ8TAD2 202 aa10.39□□□□□ -0.75
CPSF1-206ENST00000531480 DAZAP1Q96EP5 407 aaKnown RBP10.39□□□□□ -0.75
CPSF1-206ENST00000531480 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
CPSF1-206ENST00000531480 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 A0A087WWC5 75 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 FLI1Q01543 452 aaPredicted RBP10.38□□□□□ -0.75
CPSF1-206ENST00000531480 BTN1A1Q13410 526 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 ADIRFQ15847 76 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 RRN3P1Q2M238 152 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 COX8CQ7Z4L0 72 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 RNASE8Q8TDE3 154 aaKnown RBP10.38□□□□□ -0.75
CPSF1-206ENST00000531480 LINC00479Q96M42 142 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 PYGO2Q9BRQ0 406 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 TMEM208Q9BTX3 173 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 TMEM242Q9NWH2 141 aa10.38□□□□□ -0.75
CPSF1-206ENST00000531480 PSG8Q9UQ74 426 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms