RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TRAV12-3A0A0B4J271 114 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 C9JCJ5 164 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 M0R036 132 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 RPL23P62829 140 aaKnown RBP7.82□□□□□ -1.16
SOX6-213ENST00000530378 SMUG1Q53HV7 270 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 GFI1BQ5VTD9 330 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 LINC00322Q6ZN03 302 aaPredicted RBP7.82□□□□□ -1.16
SOX6-213ENST00000530378 LINC01551Q86U37 167 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 SEC11CQ9BY50 192 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 NAT8Q9UHE5 227 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 NAGKQ9UJ70 344 aa7.82□□□□□ -1.16
SOX6-213ENST00000530378 CA1P00915 261 aaPredicted RBP7.81□□□□□ -1.16
SOX6-213ENST00000530378 S100A9P06702 114 aaKnown RBP7.81□□□□□ -1.16
SOX6-213ENST00000530378 LEPP41159 167 aa7.81□□□□□ -1.16
SOX6-213ENST00000530378 TMEM183AQ8IXX5 376 aa7.81□□□□□ -1.16
SOX6-213ENST00000530378 FAM19A4Q96LR4 140 aa7.81□□□□□ -1.16
SOX6-213ENST00000530378 RNASE7Q9H1E1 156 aaKnown RBP7.81□□□□□ -1.16
SOX6-213ENST00000530378 IGHV3OR16-12A0A075B7B8 117 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 TMSB15BA0A087X1C1 80 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 TRBV6-1A0A0K0K1D8 114 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 NDUFS6O75380 124 aaKnown RBP7.8□□□□□ -1.16
SOX6-213ENST00000530378 RBMY1A1P0DJD3 496 aaKnown RBP7.8□□□□□ -1.16
SOX6-213ENST00000530378 RBMY1CP0DJD4 496 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 CDKN1BP46527 198 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 CRIP1P50238 77 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 RPL19P84098 196 aaKnown RBP7.8□□□□□ -1.16
SOX6-213ENST00000530378 RBMY1FQ15415 496 aaKnown RBP7.8□□□□□ -1.16
SOX6-213ENST00000530378 FAM74A3Q4VXF1 159 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 MUC21Q5SSG8 566 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 SAPCD1Q5SSQ6 148 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 MLST8Q9BVC4 326 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 SDF2L1Q9HCN8 221 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 ZFP30Q9Y2G7 519 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 MEGF8Q7Z7M0 2845 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 FBLL1A6NHQ2 334 aaKnown RBP7.8□□□□□ -1.16
SOX6-213ENST00000530378 A8MTW9 85 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 K7EIL1 84 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 CRXO43186 299 aaPredicted RBP7.8□□□□□ -1.16
SOX6-213ENST00000530378 SH2D1AO60880 128 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 PRM2P04554 102 aa7.8□□□□□ -1.16
SOX6-213ENST00000530378 KPRPQ5T749 579 aaPredicted RBP7.8□□□□□ -1.16
SOX6-213ENST00000530378 LOC102724200A0A096LPH7 203 aaPredicted RBP7.79□□□□□ -1.16
SOX6-213ENST00000530378 C7orf71A4D174 169 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 KLLNB2CW77 178 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 KRBOX1C9JBD0 128 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 GIG44P09565 113 aaPredicted RBP7.79□□□□□ -1.16
SOX6-213ENST00000530378 HTN1P15515 57 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 CRISP2P16562 243 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 TSPOP30536 169 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 DEFB121Q5J5C9 76 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 ODF3Q96PU9 254 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 CARHSP1Q9Y2V2 147 aaKnown RBP7.79□□□□□ -1.16
SOX6-213ENST00000530378 TENM3Q9P273 2699 aa7.79□□□□□ -1.16
SOX6-213ENST00000530378 INSP01308 110 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 FRMD6-AS1P0C7T7 363 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 ERVFC1-1P60608 527 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 NUTF2P61970 127 aaKnown RBP7.78□□□□□ -1.16
SOX6-213ENST00000530378 DEFB135Q30KP9 77 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 C10orf91Q5T1B1 145 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 FAM162BQ5T6X4 162 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 ISOC2Q96AB3 205 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 C11orf21Q9P2W6 132 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 PRKDCP78527 4128 aaKnown RBP7.78□□□□□ -1.16
SOX6-213ENST00000530378 SMCPP49901 116 aaPredicted RBP7.78□□□□□ -1.16
SOX6-213ENST00000530378 MRAPQ8TCY5 172 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 TMEM208Q9BTX3 173 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 CSTL1Q9H114 145 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 LENEPQ9Y5L5 61 aa7.78□□□□□ -1.16
SOX6-213ENST00000530378 ORM1P02763 201 aa7.77□□□□□ -1.17
SOX6-213ENST00000530378 PFN1P07737 140 aaKnown RBP7.77□□□□□ -1.17
SOX6-213ENST00000530378 GZMBP10144 247 aa7.77□□□□□ -1.17
SOX6-213ENST00000530378 IBA57Q5T440 356 aaKnown RBP7.77□□□□□ -1.17
SOX6-213ENST00000530378 NUDT10Q8NFP7 164 aa7.77□□□□□ -1.17
SOX6-213ENST00000530378 NUDT11Q96G61 164 aa7.77□□□□□ -1.17
SOX6-213ENST00000530378 RETNQ9HD89 108 aa7.77□□□□□ -1.17
SOX6-213ENST00000530378 GRIFINA4D1Z8 144 aa7.76□□□□□ -1.17
SOX6-213ENST00000530378 P01737 135 aa7.76□□□□□ -1.17
SOX6-213ENST00000530378 RNF212Q495C1 297 aa7.76□□□□□ -1.17
SOX6-213ENST00000530378 MORN3Q6PF18 240 aaPredicted RBP7.76□□□□□ -1.17
SOX6-213ENST00000530378 ATRAIDQ6UW56 229 aa7.76□□□□□ -1.17
SOX6-213ENST00000530378 CLRN3Q8NCR9 226 aa7.76□□□□□ -1.17
SOX6-213ENST00000530378 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
SOX6-213ENST00000530378 SFRP2Q96HF1 295 aa7.76□□□□□ -1.17
SOX6-213ENST00000530378 LY96Q9Y6Y9 160 aa7.76□□□□□ -1.17
SOX6-213ENST00000530378 TRAV21A0A0B4J279 112 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 TRBV7-9A0A0J9YWB2 115 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 ZNF705GA8MUZ8 300 aaPredicted RBP7.75□□□□□ -1.17
SOX6-213ENST00000530378 SPRY2O43597 315 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 ZNF324O75467 553 aaPredicted RBP7.75□□□□□ -1.17
SOX6-213ENST00000530378 APOC4P55056 127 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 TCL1AP56279 114 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 ANXA2RQ3ZCQ2 193 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 Q6AWC8 147 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 C1orf158Q8N1D5 194 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 SVBPQ8N300 66 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 OR2D3Q8NGH3 330 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 SMIM12Q96EX1 92 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 CLUHP3Q96NS8 147 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 LINC01587Q99440 93 aa7.75□□□□□ -1.17
SOX6-213ENST00000530378 TP53TG3Q9ULZ0 132 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms