RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 MAP1LC3B2A6NCE7 125 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 GGTLC3B5MD39 225 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 UMAD1C9J7I0 102 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 TCRAP04437 139 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 FHITP49789 147 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 Q6ZQT7 251 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 AKAP14Q86UN6 197 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 STOML3Q8TAV4 291 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 MAP1LC3BQ9GZQ8 125 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 EPDR1Q9UM22 224 aa9□□□□□ -0.97
CCDC90B-216ENST00000529856 TRAV8-1A0A0A6YYK1 113 aa8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 TPT1P13693 172 aaKnown RBP8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 ANXA2RQ3ZCQ2 193 aa8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 EIF4E3Q8N5X7 224 aaKnown RBP8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 MBD3L1Q8WWY6 194 aa8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 LINC00476Q8WZB0 136 aa8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 TVP23CQ96ET8 276 aa8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 NOP10Q9NPE3 64 aaKnown RBP8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 APLNQ9ULZ1 77 aa8.99□□□□□ -0.97
CCDC90B-216ENST00000529856 ALMS1Q8TCU4 4167 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 IGHV4-4A0A075B6R2 117 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 IGHV1OR15-1A0A075B7D0 117 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 CBY3A6NI87 242 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 FAM74A7A6NL05 159 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 K7EQM0 130 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 DEFB130BP0DP73 79 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 DEFB130AP0DP74 79 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 UBE2G2P60604 165 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 Q6AWC8 147 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 DPPA3Q6W0C5 159 aa8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 NKX6-2Q9C056 277 aaPredicted RBP8.98□□□□□ -0.97
CCDC90B-216ENST00000529856 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 RGS13O14921 159 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 LY6G6CO95867 125 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 IGLV2-11P01706 119 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 HTN3P15516 51 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 DAZ2Q13117 558 aaKnown RBP8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 LGALS9CQ6DKI2 356 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 LINC00612Q8N6U2 182 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 C11orf72Q8NBR9 251 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 ZNF680Q8NEM1 530 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 FAM213BQ8TBF2 198 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 SGK494Q96LW2 274 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 ATG101Q9BSB4 218 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 GSN-AS1Q9NRJ2 163 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 PSG8Q9UQ74 426 aa8.97□□□□□ -0.97
CCDC90B-216ENST00000529856 HYDINQ4G0P3 5121 aa8.96□□□□□ -0.97
CCDC90B-216ENST00000529856 A0A1B0GVG6 124 aa8.96□□□□□ -0.98
CCDC90B-216ENST00000529856 IFNA7P01567 189 aa8.96□□□□□ -0.98
CCDC90B-216ENST00000529856 TMEM75Q8N9X5 138 aa8.96□□□□□ -0.98
CCDC90B-216ENST00000529856 SFT2D1Q8WV19 159 aa8.96□□□□□ -0.98
CCDC90B-216ENST00000529856 FAM210BQ96KR6 192 aa8.96□□□□□ -0.98
CCDC90B-216ENST00000529856 TP53TG3Q9ULZ0 132 aa8.96□□□□□ -0.98
CCDC90B-216ENST00000529856 FBLL1A6NHQ2 334 aaKnown RBP8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 ATP5G1P05496 136 aa8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 ATP5G3P48201 142 aa8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 FLI1Q01543 452 aaPredicted RBP8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 MUC21Q5SSG8 566 aa8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 IBA57Q5T440 356 aaKnown RBP8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 EIF5AL1Q6IS14 154 aaKnown RBP8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 SLC51BQ86UW2 128 aa8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 LINC00479Q96M42 142 aa8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 NDFIP1Q9BT67 221 aa8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 NDUFAF3Q9BU61 184 aa8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 ARL2-SNX15V9GYD0 113 aa8.95□□□□□ -0.98
CCDC90B-216ENST00000529856 TRAV21A0A0B4J279 112 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 GAGE12BA1L429 117 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 F6UZH7 168 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 PEX7O00628 323 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 GAGE7O76087 117 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 H2AFB1P0C5Y9 115 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 GAGE12FP0CL80 117 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 GAGE12GP0CL81 117 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 GAGE12IP0CL82 117 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 RAB5CP51148 216 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 TCL1AP56279 114 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 PRNTQ86SH4 94 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 C9orf62Q8N4C0 152 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 HIST1H2BAQ96A08 127 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 C8orf49Q96NF6 230 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 KLF12Q9Y4X4 402 aa8.94□□□□□ -0.98
CCDC90B-216ENST00000529856 VPS13DQ5THJ4 4388 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 TRAV34A0A0B4J273 112 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 A0A1B0GV50 99 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 F5H768 121 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 PAGE4O60829 102 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 PPT1P50897 306 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 TDRG1Q3Y452 100 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 ZFP69Q49AA0 526 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 SAPCD1Q5SSQ6 148 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 CST9LP1Q5W188 147 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 FAM159AQ6UWV7 190 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 Q6ZTI0 123 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 TCEAL7Q9BRU2 100 aa8.93□□□□□ -0.98
CCDC90B-216ENST00000529856 SPINK4O60575 86 aa8.92□□□□□ -0.98
CCDC90B-216ENST00000529856 SULT1A2P50226 295 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms