RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 VWDEQ8N2E2 1590 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 PCBD1P61457 104 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 CIRBPQ14011 172 aaKnown RBP1.91□□□□□ -2.1
C11orf88-204ENST00000529661 ELOBQ15370 118 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 SCIMPQ6UWF3 145 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 OR5AS1Q8N127 324 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 C10orf111Q8N326 155 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 OR5AK2Q8NH90 309 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 SFT2D1Q8WV19 159 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 RAB37Q96AX2 223 aa1.91□□□□□ -2.1
C11orf88-204ENST00000529661 SOX21Q9Y651 276 aaPredicted RBP1.91□□□□□ -2.1
C11orf88-204ENST00000529661 STRCP1A6NGW2 1772 aa1.9□□□□□ -2.1
C11orf88-204ENST00000529661 CCNB3Q8WWL7 1395 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 TCRBV4S1A1TA0A5B7 111 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 F6UZH7 168 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 RBP4P02753 201 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 CD14P08571 375 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 PYYP10082 97 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 BTG2P78543 158 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 PDE6HQ13956 83 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 DEFB113Q30KQ7 82 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 LINC00269Q8N2A0 174 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 TCTEX1D1Q8N7M0 179 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.9□□□□□ -2.11
C11orf88-204ENST00000529661 OTOSQ8NHW6 89 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 SPACA4Q8TDM5 124 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 Q96M85 177 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 CST9LQ9H4G1 147 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 LSM2Q9Y333 95 aaKnown RBP1.9□□□□□ -2.11
C11orf88-204ENST00000529661 MPC1Q9Y5U8 109 aa1.9□□□□□ -2.11
C11orf88-204ENST00000529661 CHCHD2Q9Y6H1 151 aaPredicted RBP1.9□□□□□ -2.11
C11orf88-204ENST00000529661 FN1P02751 2386 aaKnown RBP1.9□□□□□ -2.11
C11orf88-204ENST00000529661 SCRIBQ14160 1630 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 PLXNA2O75051 1894 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 TRAV10A0A0B4J240 114 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 A0A0G2JMM0 328 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 A0A1W2PPB8 328 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 C2orf70A6NJV1 201 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 A6NN06 94 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 KIR3DP1A8MWS1 328 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 M0R2P5 195 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 CORTO00230 105 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 ERC2-IT1O76042 136 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 CKS2P33552 79 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 Q1T7F1 81 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 CLLU1Q5K131 121 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 C2orf82Q6UX34 121 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 NAA38Q9BRA0 125 aaKnown RBP1.89□□□□□ -2.11
C11orf88-204ENST00000529661 TXNDC17Q9BRA2 123 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 PSMG3Q9BT73 122 aaPredicted RBP1.89□□□□□ -2.11
C11orf88-204ENST00000529661 PDCD10Q9BUL8 212 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 SNRNP25Q9BV90 132 aaKnown RBP1.89□□□□□ -2.11
C11orf88-204ENST00000529661 TTTY12Q9BZ98 90 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 CST11Q9H112 138 aa1.89□□□□□ -2.11
C11orf88-204ENST00000529661 FREM1Q5H8C1 2179 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 LOC100130705A0A1B0GUX0 176 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 SMIM6P0DI80 62 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 CCSMST1Q4G0I0 132 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 LINC01545Q5VT33 79 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 KRTAP26-1Q6PEX3 210 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 ZNF833PQ6ZTB9 187 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 PP6455Q8WZ26 134 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 DPH3Q96FX2 82 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 C14orf144Q96I85 54 aa1.88□□□□□ -2.11
C11orf88-204ENST00000529661 CHD3Q12873 2000 aaKnown RBP1.88□□□□□ -2.11
C11orf88-204ENST00000529661 QRICH2Q9H0J4 1663 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 SIP14410 1827 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 TRAV12-2A0A075B6T6 113 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 IFITM5A6NNB3 132 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 BBIP1A8MTZ0 92 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 C5orf67F2Z3F1 127 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 H3BRN7 92 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 HYPMO75409 117 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 CXCL8P10145 99 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 DEFB103AP81534 67 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 FAM19A2Q8N3H0 131 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 C4orf3Q8WVX3 66 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 CIB3Q96Q77 187 aaPredicted RBP1.87□□□□□ -2.11
C11orf88-204ENST00000529661 SCN3BQ9NY72 215 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 BAHCC1Q9P281 2608 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 LAMB4A4D0S4 1761 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 ICE1Q9Y2F5 2266 aa1.87□□□□□ -2.11
C11orf88-204ENST00000529661 BCORL1Q5H9F3 1711 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 VPS8Q8N3P4 1428 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 IGHV1-24A0A0C4DH33 117 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 ZNF736B4DX44 427 aaPredicted RBP1.86□□□□□ -2.11
C11orf88-204ENST00000529661 AKAIN1P0CW23 69 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 MEIG1Q5JSS6 88 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 C1orf137Q5JT78 98 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 ATP11AUNQ6ZP68 121 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 Q6ZUT4 128 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 KCNRGQ8N5I3 272 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 ATP6V0E2Q8NHE4 81 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 ZNF431Q8TF32 576 aaPredicted RBP1.86□□□□□ -2.11
C11orf88-204ENST00000529661 PPP3R2Q96LZ3 170 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 RERGLQ9H628 205 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 COA4Q9NYJ1 87 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 A2ML1A8K2U0 1454 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 ALPK2Q86TB3 2170 aa1.86□□□□□ -2.11
C11orf88-204ENST00000529661 BAZ2BQ9UIF8 2168 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms