RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 LINC00869P0C866 280 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 PSMB3P49720 205 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 SELENOTP62341 195 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 VAMP2P63027 116 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 SLC38A11Q08AI6 406 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 SERTAD4-AS1Q5TG53 156 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 TEPPQ6URK8 271 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 ISOC2Q96AB3 205 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 NIPSNAP3BQ9BS92 247 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 SHANK2-AS3Q9BTD1 123 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 RSG1Q9BU20 258 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 TMEM147Q9BVK8 224 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 SLC25A39Q9BZJ4 359 aaPredicted RBP6.11□□□□□ -1.43
SSBP3-212ENST00000528930 SLC25A22Q9H936 323 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 TRAV8-2A0A0B4J237 113 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 IGSF23A1L1A6 192 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 C16orf90A8MZG2 172 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 M0R143 59 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 ISLRO14498 428 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 AGPAT2O15120 278 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 HYPMO75409 117 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 CST7O76096 145 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 HLA-DRB4P13762 266 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 ID1P41134 155 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 GALR1P47211 349 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 ERVFC1-1P60608 527 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 BAXQ07812 192 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 TMEM241Q24JQ0 296 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 ZNF674Q2M3X9 581 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 VWC2Q2TAL6 325 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 TMEM41BQ5BJD5 291 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 TMEM252Q8N6L7 170 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 Q8NAQ8 132 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 FAM210BQ96KR6 192 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 PACRGQ96M98 296 aaPredicted RBP6.1□□□□□ -1.43
SSBP3-212ENST00000528930 GPR82Q96P67 336 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 UHRF2Q96PU4 802 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 MGST2Q99735 147 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BLQ99880 126 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 SLC25A31Q9H0C2 315 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 C11orf68Q9H3H3 251 aaKnown RBP6.1□□□□□ -1.43
SSBP3-212ENST00000528930 LYRM2Q9NU23 88 aaPredicted RBP6.1□□□□□ -1.43
SSBP3-212ENST00000528930 HIGD1AQ9Y241 93 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 HLA-DRB4X5D2U9 266 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 X6R8D5 127 aa6.1□□□□□ -1.43
SSBP3-212ENST00000528930 MRPS12O15235 138 aaKnown RBP6.09□□□□□ -1.43
SSBP3-212ENST00000528930 TYMSP04818 313 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 OR5G3P0C626 314 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 TRGC1P0CF51 173 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 GZMBP10144 247 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 S100A10P60903 97 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 IQCJQ1A5X6 159 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 IGFL4Q6B9Z1 124 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 FOXI2Q6ZQN5 318 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 TMEM217Q8N7C4 229 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 TMEM37Q8WXS4 190 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 C16orf92Q96LL3 132 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 AP5S1Q9NUS5 200 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 CLEC5AQ9NY25 188 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 WDR83OSQ9Y284 106 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
SSBP3-212ENST00000528930 A0A0J9YX75 114 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 A8MTW9 85 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 F6UB75 175 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 DEFB4AO15263 64 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 RPL7P18124 248 aaKnown RBP6.08□□□□□ -1.44
SSBP3-212ENST00000528930 S100A7P31151 101 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 RANP62826 216 aaKnown RBP6.08□□□□□ -1.44
SSBP3-212ENST00000528930 ACOT6Q3I5F7 207 aaPredicted RBP6.08□□□□□ -1.44
SSBP3-212ENST00000528930 SAMD13Q5VXD3 122 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 SPATA31B1PQ5VZV4 182 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 MIC13Q5XKP0 118 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF664Q8N3J9 261 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF709Q8N972 641 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 MBD3L1Q8WWY6 194 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 PARD6GQ9BYG4 376 aaPredicted RBP6.08□□□□□ -1.44
SSBP3-212ENST00000528930 XCL2Q9UBD3 114 aa6.08□□□□□ -1.44
SSBP3-212ENST00000528930 DNAH5Q8TE73 4624 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 A0A087X0K7 114 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 IGHV4-28A0A0C4DH34 117 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 DLEU1O43261 78 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 IGKV3-20P01619 116 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 TRGC2P03986 189 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 CXCL1P09341 107 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 MIFP14174 115 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 AKR1C3P42330 323 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 FAM3BP58499 235 aaPredicted RBP6.07□□□□□ -1.44
SSBP3-212ENST00000528930 FXYD7P58549 80 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 NANOS2P60321 138 aaKnown RBP6.07□□□□□ -1.44
SSBP3-212ENST00000528930 ICAM4Q14773 271 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 ATP6V1FQ16864 119 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 FAM78BQ5VT40 261 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 MORN5Q5VZ52 161 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 ZNF705AQ6ZN79 300 aaPredicted RBP6.07□□□□□ -1.44
SSBP3-212ENST00000528930 LINC00305Q7Z4B0 112 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 C11orf45Q8TAV5 145 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 FRZBQ92765 325 aa6.07□□□□□ -1.44
SSBP3-212ENST00000528930 TMEM18Q96B42 140 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms