RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 SEC11BP0C7V7 166 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 CRISP2P16562 243 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 RANP62826 216 aaKnown RBP6.78□□□□□ -1.32
CHD7-208ENST00000528280 DAZ2Q13117 558 aaKnown RBP6.78□□□□□ -1.32
CHD7-208ENST00000528280 ZNF266Q14584 549 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 SOHLH1Q5JUK2 328 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 PQLC2Q6ZP29 291 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 IQCF2Q8IXL9 164 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 FXYD5Q96DB9 178 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 FAM19A4Q96LR4 140 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 ATG101Q9BSB4 218 aa6.78□□□□□ -1.32
CHD7-208ENST00000528280 J3KRW8 73 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 ZNF324O75467 553 aaPredicted RBP6.77□□□□□ -1.33
CHD7-208ENST00000528280 MBP02144 154 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 OR10J4P0C629 311 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 RNASE4P34096 147 aaKnown RBP6.77□□□□□ -1.33
CHD7-208ENST00000528280 ZNF138P52744 262 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 CCL18P55774 89 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 ERCC8Q13216 396 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 ANXA2RQ3ZCQ2 193 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 C10orf91Q5T1B1 145 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 FAM122CQ6P4D5 195 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 ZNF503Q96F45 646 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 SMIM3Q9BZL3 60 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 ZNF492Q9P255 531 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 CARHSP1Q9Y2V2 147 aaKnown RBP6.77□□□□□ -1.33
CHD7-208ENST00000528280 LENEPQ9Y5L5 61 aa6.77□□□□□ -1.33
CHD7-208ENST00000528280 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 TMEM218A2RU14 115 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 H3BNG1 76 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 UBE2L3P68036 154 aaKnown RBP6.76□□□□□ -1.33
CHD7-208ENST00000528280 SERF2P84101 59 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 KIR3DS1Q14943 382 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 SVBPQ8N300 66 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 LINC00612Q8N6U2 182 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 LYPD6BQ8NI32 183 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 CMTM2Q8TAZ6 248 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 TMED6Q8WW62 240 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 C18orf15Q96N68 181 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 SMDT1Q9H4I9 107 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 OTORQ9NRC9 128 aa6.76□□□□□ -1.33
CHD7-208ENST00000528280 GAGE12BA1L429 117 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 UMAD1C9J7I0 102 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 GAGE7O76087 117 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 NUDT3O95989 172 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 GAGE12FP0CL80 117 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 GAGE12GP0CL81 117 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 GAGE12IP0CL82 117 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 PRB4P10163 310 aaPredicted RBP6.75□□□□□ -1.33
CHD7-208ENST00000528280 SLAQ13239 276 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 OR5I1Q13606 314 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 SMUG1Q53HV7 270 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 IBA57Q5T440 356 aaKnown RBP6.75□□□□□ -1.33
CHD7-208ENST00000528280 RPL7L1Q6DKI1 246 aaKnown RBP6.75□□□□□ -1.33
CHD7-208ENST00000528280 OR10G4Q8NGN3 311 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 OR10G9Q8NGN4 311 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 OR10G7Q8NGN6 311 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 GNPNAT1Q96EK6 184 aaPredicted RBP6.75□□□□□ -1.33
CHD7-208ENST00000528280 VGLL1Q99990 258 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 SEC11CQ9BY50 192 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 Q9H3A6 140 aa6.75□□□□□ -1.33
CHD7-208ENST00000528280 TRGV2A0A075B6R0 118 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 IGHV1OR15-1A0A075B7D0 117 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 IGKV2-40A0A087WW87 121 aaPredicted RBP6.74□□□□□ -1.33
CHD7-208ENST00000528280 SERTM2A0A1B0GWG4 89 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 PGPA6NDG6 321 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 IGKV2D-40P01614 121 aaPredicted RBP6.74□□□□□ -1.33
CHD7-208ENST00000528280 APOC3P02656 99 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 OR2G3Q8NGZ4 309 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 PSMG3Q9BT73 122 aaPredicted RBP6.74□□□□□ -1.33
CHD7-208ENST00000528280 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 WFDC1Q9HC57 220 aa6.74□□□□□ -1.33
CHD7-208ENST00000528280 K7EQM0 130 aa6.73□□□□□ -1.33
CHD7-208ENST00000528280 M0R2N4 97 aa6.73□□□□□ -1.33
CHD7-208ENST00000528280 SNAPINO95295 136 aa6.73□□□□□ -1.33
CHD7-208ENST00000528280 BTN1A1Q13410 526 aa6.73□□□□□ -1.33
CHD7-208ENST00000528280 DPPA3Q6W0C5 159 aa6.73□□□□□ -1.33
CHD7-208ENST00000528280 ZFAND2AQ8N6M9 145 aa6.73□□□□□ -1.33
CHD7-208ENST00000528280 NKX6-2Q9C056 277 aaPredicted RBP6.73□□□□□ -1.33
CHD7-208ENST00000528280 GSN-AS1Q9NRJ2 163 aa6.73□□□□□ -1.33
CHD7-208ENST00000528280 TMA7Q9Y2S6 64 aaKnown RBP6.73□□□□□ -1.33
CHD7-208ENST00000528280 DNAH6Q9C0G6 4158 aa6.73□□□□□ -1.33
CHD7-208ENST00000528280 TRAV26-1A0A087WT03 109 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 FBLL1A6NHQ2 334 aaKnown RBP6.72□□□□□ -1.33
CHD7-208ENST00000528280 SPINK4O60575 86 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 MED14OSP0DP75 135 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 CDC34P49427 236 aaPredicted RBP6.72□□□□□ -1.33
CHD7-208ENST00000528280 TCL1AP56279 114 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 ZNF415Q09FC8 603 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 PEA15Q15121 130 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 C1orf134Q5TEV5 83 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 FAM159AQ6UWV7 190 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 Q6ZR54 194 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 C11orf72Q8NBR9 251 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 SPXQ9BT56 116 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 ACTR3CQ9C0K3 210 aaPredicted RBP6.72□□□□□ -1.33
CHD7-208ENST00000528280 TMEM167BQ9NRX6 74 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 KLF12Q9Y4X4 402 aa6.72□□□□□ -1.33
CHD7-208ENST00000528280 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms