RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 MANBALQ9NQG1 85 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 TRAV12-3A0A0B4J271 114 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 TMEM218A2RU14 115 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 C9JQL5 133 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 ZNF324O75467 553 aaPredicted RBP9.23□□□□□ -0.93
SCN3B-205ENST00000528267 TAGLN2P37802 199 aaKnown RBP9.23□□□□□ -0.93
SCN3B-205ENST00000528267 LEPP41159 167 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 CSN1S1P47710 185 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 TMEM78Q5T7P6 136 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 ARL6IP6Q8N6S5 226 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 CMTM2Q8TAZ6 248 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 LYSTQ99698 3801 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 PPP1R14DQ9NXH3 145 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 VAX2Q9UIW0 290 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 EPDR1Q9UM22 224 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
SCN3B-205ENST00000528267 C7orf71A4D174 169 aa9.22□□□□□ -0.93
SCN3B-205ENST00000528267 PAGE4O60829 102 aa9.22□□□□□ -0.93
SCN3B-205ENST00000528267 ALMS1Q8TCU4 4167 aa9.21□□□□□ -0.93
SCN3B-205ENST00000528267 TRAV34A0A0B4J273 112 aa9.21□□□□□ -0.94
SCN3B-205ENST00000528267 F6UZH7 168 aa9.21□□□□□ -0.94
SCN3B-205ENST00000528267 SFTA3P0C7M3 94 aa9.21□□□□□ -0.94
SCN3B-205ENST00000528267 TSPOP30536 169 aa9.21□□□□□ -0.94
SCN3B-205ENST00000528267 RNASE4P34096 147 aaKnown RBP9.21□□□□□ -0.94
SCN3B-205ENST00000528267 NANOS2P60321 138 aaKnown RBP9.21□□□□□ -0.94
SCN3B-205ENST00000528267 ZFAND6Q6FIF0 208 aa9.21□□□□□ -0.94
SCN3B-205ENST00000528267 C8orf49Q96NF6 230 aa9.21□□□□□ -0.94
SCN3B-205ENST00000528267 ATG101Q9BSB4 218 aa9.21□□□□□ -0.94
SCN3B-205ENST00000528267 TRBV7-9A0A0J9YWB2 115 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 SMIM9A6NGZ8 99 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 F8W036 122 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 PEX7O00628 323 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 SRP19P09132 144 aaKnown RBP9.2□□□□□ -0.94
SCN3B-205ENST00000528267 ZNF80P51504 273 aaPredicted RBP9.2□□□□□ -0.94
SCN3B-205ENST00000528267 MEF2BQ02080 365 aaPredicted RBP9.2□□□□□ -0.94
SCN3B-205ENST00000528267 CYB561D1Q8N8Q1 229 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
SCN3B-205ENST00000528267 LINC01587Q99440 93 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 TMEM208Q9BTX3 173 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 PSG8Q9UQ74 426 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 ARL2-SNX15V9GYD0 113 aa9.2□□□□□ -0.94
SCN3B-205ENST00000528267 HYDINQ4G0P3 5121 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 H7BYZ3 331 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 GPX1P07203 203 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 ADCYAP1P18509 176 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 EMP1P54849 157 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 TAS2R60P59551 318 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 RRN3P1Q2M238 152 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 CASC10Q5T4H9 136 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 CST9LP1Q5W188 147 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 TMEM75Q8N9X5 138 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 C20orf144Q9BQM9 153 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 TXNDC17Q9BRA2 123 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 SEC11CQ9BY50 192 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 TP53TG3Q9ULZ0 132 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 LENEPQ9Y5L5 61 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 RYR3Q15413 4870 aa9.19□□□□□ -0.94
SCN3B-205ENST00000528267 SERTM2A0A1B0GWG4 89 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 C11orf94C9JXX5 98 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 NDUFS6O75380 124 aaKnown RBP9.18□□□□□ -0.94
SCN3B-205ENST00000528267 HTN1P15515 57 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 CEBPGP53567 150 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 FLI1Q01543 452 aaPredicted RBP9.18□□□□□ -0.94
SCN3B-205ENST00000528267 C12orf74Q32Q52 190 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 C10orf91Q5T1B1 145 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 VPS13DQ5THJ4 4388 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 Q6AWC8 147 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 Q86TA4 180 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 TMEM256Q8N2U0 113 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 C11orf72Q8NBR9 251 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 C11orf45Q8TAV5 145 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 C2CD4CQ8TF44 421 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 RYR2Q92736 4967 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 DKK2Q9UBU2 259 aa9.18□□□□□ -0.94
SCN3B-205ENST00000528267 CARHSP1Q9Y2V2 147 aaKnown RBP9.18□□□□□ -0.94
SCN3B-205ENST00000528267 APOC3P02656 99 aa9.17□□□□□ -0.94
SCN3B-205ENST00000528267 SOHLH1Q5JUK2 328 aa9.17□□□□□ -0.94
SCN3B-205ENST00000528267 FAM222AQ5U5X8 452 aa9.17□□□□□ -0.94
SCN3B-205ENST00000528267 Q6ZTC4 211 aa9.17□□□□□ -0.94
SCN3B-205ENST00000528267 LINC00467Q9BRT7 94 aa9.17□□□□□ -0.94
SCN3B-205ENST00000528267 NKX6-2Q9C056 277 aaPredicted RBP9.17□□□□□ -0.94
SCN3B-205ENST00000528267 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
SCN3B-205ENST00000528267 TMEM250H0YL14 139 aa9.16□□□□□ -0.94
SCN3B-205ENST00000528267 C3orf84H3BNL1 204 aa9.16□□□□□ -0.94
SCN3B-205ENST00000528267 PDE6DO43924 150 aa9.16□□□□□ -0.94
SCN3B-205ENST00000528267 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
SCN3B-205ENST00000528267 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
SCN3B-205ENST00000528267 HIST1H2BAQ96A08 127 aa9.16□□□□□ -0.94
SCN3B-205ENST00000528267 PYGO2Q9BRQ0 406 aa9.16□□□□□ -0.94
SCN3B-205ENST00000528267 NIPSNAP3BQ9BS92 247 aa9.16□□□□□ -0.94
SCN3B-205ENST00000528267 KLF12Q9Y4X4 402 aa9.16□□□□□ -0.94
SCN3B-205ENST00000528267 CRIP1P50238 77 aa9.15□□□□□ -0.94
SCN3B-205ENST00000528267 C16orf74Q96GX8 76 aa9.15□□□□□ -0.94
SCN3B-205ENST00000528267 IGHV1OR15-1A0A075B7D0 117 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 TRBV6-1A0A0K0K1D8 114 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 TMEM189A5PLL7 270 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 CXorf65A6NEN9 183 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms