RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	NAGK	Q9UJ70	344 aa		4.81	□□□□□ -1.64
PABPC4-222	ENST00000527718	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.81	□□□□□ -1.64
PABPC4-222	ENST00000527718	IGHV3-35	A0A0C4DH35	117 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	C5orf52	A6NGY3	159 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	OR4C46	A6NHA9	309 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	NPIPB6	E9PJ23	425 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	EIF4EBP3	O60516	100 aa	Predicted RBP	4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	PPP1R17	O96001	155 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	TRGC1	P0CF51	173 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	SMIM6	P0DI80	62 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	PMCH	P20382	165 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	NDUFA6	P56556	154 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	HILS1	P60008	231 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	CACNG7	P62955	275 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	LBH	Q53QV2	105 aa	Predicted RBP	4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	TCF24	Q7RTU0	167 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	BAGE3	Q86Y29	109 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	OR1N2	Q8NGR9	330 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	CSPG4	Q6UVK1	2322 aa		4.8	□□□□□ -1.64
PABPC4-222	ENST00000527718	NAV3	Q8IVL0	2385 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	CLPSL1	A2RUU4	121 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	C19orf71	A6NCJ1	209 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	CBY3	A6NI87	242 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718		H3BTX0	84 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	SLC17A3	O00476	420 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BK	O60814	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	IGLV2-8	P01709	118 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	AMBP	P02760	352 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	ORM1	P02763	201 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	PPBP	P02775	128 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BJ	P06899	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HOXA5	P20719	270 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BO	P23527	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HOXD3	P31249	432 aa	Predicted RBP	4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BB	P33778	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BD	P58876	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	SNRPE	P62304	92 aa	Known RBP	4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BC	P62807	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST2H2BE	Q16778	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	COA6	Q5JTJ3	125 aa	Known RBP	4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	KLHL30-AS1	Q8NEE0	82 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	NUP35	Q8NFH5	326 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	OR2K2	Q8NGT1	345 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BH	Q93079	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	LINC00479	Q96M42	142 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	PACRG	Q96M98	296 aa	Predicted RBP	4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BN	Q99877	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	HIST1H2BM	Q99879	126 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	KLK15	Q9H2R5	256 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	LAMTOR2	Q9Y2Q5	125 aa		4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.79	□□□□□ -1.64
PABPC4-222	ENST00000527718		M0R3E3	92 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	ZNF207	O43670	478 aa	Known RBP	4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	GPX1	P07203	203 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	MED14OS	P0DP75	135 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	S100A4	P26447	101 aa	Known RBP	4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	TCL1A	P56279	114 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	SYNJ2BP	P57105	145 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	NUTF2	P61970	127 aa	Known RBP	4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718		Q0VG73	95 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	KLF5	Q13887	457 aa	Predicted RBP	4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	DNLZ	Q5SXM8	178 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	IL17REL	Q6ZVW7	336 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	FER1L6-AS1	Q8NA97	138 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	OR11H1	Q8NG94	326 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	OR8A1	Q8NGG7	326 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	OR9G4	Q8NGQ1	327 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	SPAG8	Q99932	426 aa	Predicted RBP	4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	SAMD10	Q9BYL1	202 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	SIGLEC8	Q9NYZ4	499 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	CSMD1	Q96PZ7	3565 aa		4.78	□□□□□ -1.64
PABPC4-222	ENST00000527718	AKAP9	Q99996	3911 aa		4.78	□□□□□ -1.65
PABPC4-222	ENST00000527718	ABCA1	O95477	2261 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	NIPBL	Q6KC79	2804 aa	eCLIP	4.77	□□□□□ -1.65	1e-6	■■■■□ 23.7
PABPC4-222	ENST00000527718	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	TRAV8-1	A0A0A6YYK1	113 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGHV3-66	A0A0C4DH42	116 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	LINC01549	A6NIU2	74 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	C2orf70	A6NJV1	201 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	SH2D1A	O60880	128 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGKV2D-40	P01614	121 aa	Predicted RBP	4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGLV2-11	P01706	119 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	SNRPC	P09234	159 aa	Known RBP	4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	CBLN1	P23435	193 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	ASIP	P42127	132 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	CAMP	P49913	170 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	MRPL54	Q6P161	138 aa	Known RBP	4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	FAM159A	Q6UWV7	190 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	UNQ9165/PRO28630	Q6UXU0	137 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	FOXI2	Q6ZQN5	318 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	LCNL1	Q6ZST4	164 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718		Q6ZSV7	163 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	SYT8	Q8NBV8	401 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	ZC2HC1A	Q96GY0	325 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	RAX2	Q96IS3	184 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	PGLYRP4	Q96LB8	373 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	C17orf77	Q96MU5	243 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	DUX5	Q96PT3	197 aa		4.77	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms