RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 GAGE12GP0CL81 117 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 GAGE12IP0CL82 117 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 RNF212Q495C1 297 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 UBE2DNLQ8IWF7 75 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 ST6GAL2Q96JF0 529 aa18.52■□□□□ 0.56
TSPAN4-217ENST00000527644 IBA57Q5T440 356 aaKnown RBP18.51■□□□□ 0.55
TSPAN4-217ENST00000527644 Q6ZQT7 251 aa18.51■□□□□ 0.55
TSPAN4-217ENST00000527644 GOLT1AQ6ZVE7 132 aa18.51■□□□□ 0.55
TSPAN4-217ENST00000527644 TMEM167BQ9NRX6 74 aa18.51■□□□□ 0.55
TSPAN4-217ENST00000527644 BIRC6Q9NR09 4857 aa18.5■□□□□ 0.55
TSPAN4-217ENST00000527644 TCL1AP56279 114 aa18.49■□□□□ 0.55
TSPAN4-217ENST00000527644 Q6AWC8 147 aa18.49■□□□□ 0.55
TSPAN4-217ENST00000527644 Q6ZTI0 123 aa18.49■□□□□ 0.55
TSPAN4-217ENST00000527644 ARPC5LQ9BPX5 153 aa18.49■□□□□ 0.55
TSPAN4-217ENST00000527644 TP53TG3Q9ULZ0 132 aa18.49■□□□□ 0.55
TSPAN4-217ENST00000527644 SERTM2A0A1B0GWG4 89 aa18.48■□□□□ 0.55
TSPAN4-217ENST00000527644 SMLR1H3BR10 107 aa18.48■□□□□ 0.55
TSPAN4-217ENST00000527644 GNG5P63218 68 aa18.48■□□□□ 0.55
TSPAN4-217ENST00000527644 CYTL1Q9NRR1 136 aa18.48■□□□□ 0.55
TSPAN4-217ENST00000527644 OR5I1Q13606 314 aa18.47■□□□□ 0.55
TSPAN4-217ENST00000527644 SSX7Q7RTT5 188 aa18.47■□□□□ 0.55
TSPAN4-217ENST00000527644 C5orf17Q8NAS9 161 aa18.47■□□□□ 0.55
TSPAN4-217ENST00000527644 C18orf15Q96N68 181 aa18.47■□□□□ 0.55
TSPAN4-217ENST00000527644 KLF12Q9Y4X4 402 aa18.47■□□□□ 0.55
TSPAN4-217ENST00000527644 FRAS1Q86XX4 4008 aa18.46■□□□□ 0.55
TSPAN4-217ENST00000527644 TRGV1A0A0A0MS02 117 aa18.46■□□□□ 0.55
TSPAN4-217ENST00000527644 CTXND1A0A1B0GTU2 59 aa18.46■□□□□ 0.55
TSPAN4-217ENST00000527644 SPINK4O60575 86 aa18.46■□□□□ 0.55
TSPAN4-217ENST00000527644 NUDT3O95989 172 aa18.46■□□□□ 0.55
TSPAN4-217ENST00000527644 AKR1C8PQ5T2L2 129 aa18.46■□□□□ 0.55
TSPAN4-217ENST00000527644 TRGV2A0A075B6R0 118 aa18.45■□□□□ 0.54
TSPAN4-217ENST00000527644 ZNF726P1Q15940 193 aa18.45■□□□□ 0.54
TSPAN4-217ENST00000527644 TRAV8-1A0A0A6YYK1 113 aa18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 TCRAP04437 139 aa18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 HOXA5P20719 270 aa18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 FAM3BP58499 235 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 SUMO1P63165 101 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 ZNF345Q14585 488 aa18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 MUC21Q5SSG8 566 aa18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 KCNRGQ8N5I3 272 aa18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 TMPRSS5Q9H3S3 457 aa18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 TREM1Q9NP99 234 aa18.44■□□□□ 0.54
TSPAN4-217ENST00000527644 TRAV26-1A0A087WT03 109 aa18.43■□□□□ 0.54
TSPAN4-217ENST00000527644 K7EQM0 130 aa18.43■□□□□ 0.54
TSPAN4-217ENST00000527644 ZNF415Q09FC8 603 aa18.43■□□□□ 0.54
TSPAN4-217ENST00000527644 LGALS9BQ3B8N2 356 aa18.43■□□□□ 0.54
TSPAN4-217ENST00000527644 FAM159AQ6UWV7 190 aa18.43■□□□□ 0.54
TSPAN4-217ENST00000527644 IQCF2Q8IXL9 164 aa18.43■□□□□ 0.54
TSPAN4-217ENST00000527644 TVP23CQ96ET8 276 aa18.43■□□□□ 0.54
TSPAN4-217ENST00000527644 ATG101Q9BSB4 218 aa18.43■□□□□ 0.54
TSPAN4-217ENST00000527644 A0A1W2PRE2 83 aa18.42■□□□□ 0.54
TSPAN4-217ENST00000527644 HMSDA8MTL9 139 aa18.42■□□□□ 0.54
TSPAN4-217ENST00000527644 GGTLC3B5MD39 225 aa18.42■□□□□ 0.54
TSPAN4-217ENST00000527644 EPDR1Q9UM22 224 aa18.42■□□□□ 0.54
TSPAN4-217ENST00000527644 TRAV21A0A0B4J279 112 aa18.41■□□□□ 0.54
TSPAN4-217ENST00000527644 TDRG1Q3Y452 100 aa18.41■□□□□ 0.54
TSPAN4-217ENST00000527644 OR11H4Q8NGC9 324 aa18.41■□□□□ 0.54
TSPAN4-217ENST00000527644 NDFIP1Q9BT67 221 aa18.41■□□□□ 0.54
TSPAN4-217ENST00000527644 TRGV11A0A075B6L2 103 aa18.4■□□□□ 0.54
TSPAN4-217ENST00000527644 H3BNG1 76 aa18.4■□□□□ 0.54
TSPAN4-217ENST00000527644 SGK494Q96LW2 274 aa18.4■□□□□ 0.54
TSPAN4-217ENST00000527644 A0A0D9SG52 128 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 A0A0J9YY99 117 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 F6UZH7 168 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 M0R2N4 97 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 CCL18P55774 89 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 TMEM183BQ1AE95 376 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 TMEM183AQ8IXX5 376 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 MDFICQ9P1T7 246 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 PSG8Q9UQ74 426 aa18.39■□□□□ 0.53
TSPAN4-217ENST00000527644 FBLL1A6NHQ2 334 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-217ENST00000527644 CYB561D1Q8N8Q1 229 aa18.38■□□□□ 0.53
TSPAN4-217ENST00000527644 MRPL16Q9NX20 251 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-217ENST00000527644 NAGKQ9UJ70 344 aa18.38■□□□□ 0.53
TSPAN4-217ENST00000527644 NACAE9PAV3 2078 aa18.38■□□□□ 0.53
TSPAN4-217ENST00000527644 IGLV2-18A0A075B6J9 118 aa18.37■□□□□ 0.53
TSPAN4-217ENST00000527644 FGF8P55075 233 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-217ENST00000527644 SPXQ9BT56 116 aa18.37■□□□□ 0.53
TSPAN4-217ENST00000527644 NKX6-2Q9C056 277 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-217ENST00000527644 DNAH2Q9P225 4427 aa18.36■□□□□ 0.53
TSPAN4-217ENST00000527644 IGLV2-11P01706 119 aa18.36■□□□□ 0.53
TSPAN4-217ENST00000527644 FLI1Q01543 452 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-217ENST00000527644 TMEM75Q8N9X5 138 aa18.36■□□□□ 0.53
TSPAN4-217ENST00000527644 MUC4Q99102 2169 aa18.35■□□□□ 0.53
TSPAN4-217ENST00000527644 MAP1LC3B2A6NCE7 125 aa18.35■□□□□ 0.53
TSPAN4-217ENST00000527644 Q6ZR54 194 aa18.35■□□□□ 0.53
TSPAN4-217ENST00000527644 MAP1LC3BQ9GZQ8 125 aa18.35■□□□□ 0.53
TSPAN4-217ENST00000527644 KANTRA0A1W2PQU2 76 aa18.34■□□□□ 0.53
TSPAN4-217ENST00000527644 SEC11BP0C7V7 166 aa18.34■□□□□ 0.53
TSPAN4-217ENST00000527644 UBE2G2P60604 165 aa18.34■□□□□ 0.53
TSPAN4-217ENST00000527644 LINC00336Q6ZUF6 198 aa18.34■□□□□ 0.53
TSPAN4-217ENST00000527644 KCNS1Q96KK3 526 aa18.34■□□□□ 0.53
TSPAN4-217ENST00000527644 LINC00588Q9Y4M8 146 aa18.34■□□□□ 0.53
TSPAN4-217ENST00000527644 FAM74A7A6NL05 159 aa18.33■□□□□ 0.52
TSPAN4-217ENST00000527644 BCL2L11O43521 198 aa18.33■□□□□ 0.52
TSPAN4-217ENST00000527644 GNRH2O43555 120 aa18.33■□□□□ 0.52
TSPAN4-217ENST00000527644 IFNA7P01567 189 aa18.33■□□□□ 0.52
TSPAN4-217ENST00000527644 SAPCD1Q5SSQ6 148 aa18.33■□□□□ 0.52
TSPAN4-217ENST00000527644 PRNTQ86SH4 94 aa18.33■□□□□ 0.52
TSPAN4-217ENST00000527644 STOML3Q8TAV4 291 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 207.5 ms