RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 ALG5Q9Y673 324 aa9.44□□□□□ -0.9
SSSCA1-204ENST00000527413 EIF3GO75821 320 aaKnown RBP eCLIP9.43□□□□□ -0.9
SSSCA1-204ENST00000527413 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
SSSCA1-204ENST00000527413 ZNF266Q14584 549 aa9.43□□□□□ -0.9
SSSCA1-204ENST00000527413 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
SSSCA1-204ENST00000527413 VSIG2Q96IQ7 327 aa9.43□□□□□ -0.9
SSSCA1-204ENST00000527413 UPK3BQ9BT76 320 aa9.43□□□□□ -0.9
SSSCA1-204ENST00000527413 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
SSSCA1-204ENST00000527413 A0A096LPF7 62 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 DIRC3C9JPN6 131 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 RAB2AP61019 212 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 TNP2Q05952 138 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 ZNF415Q09FC8 603 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 ESRGQ1W209 222 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 ST6GAL2Q96JF0 529 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 Q9H8V8 135 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 MRPS16Q9Y3D3 137 aaKnown RBP9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 LENEPQ9Y5L5 61 aa9.42□□□□□ -0.9
SSSCA1-204ENST00000527413 A0A1W2PPV4 95 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 PTTG1O95997 202 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 TTC32Q5I0X7 151 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 MUC21Q5SSG8 566 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 Q6AWC8 147 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 PQLC2Q6ZP29 291 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 HYLS1Q96M11 299 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 KRTAP17-1Q9BYP8 105 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 KRTAP1-5Q9BYS1 174 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 OTORQ9NRC9 128 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 RPH3ALQ9UNE2 315 aa9.41□□□□□ -0.9
SSSCA1-204ENST00000527413 IGHV3-53P01767 116 aa9.4□□□□□ -0.9
SSSCA1-204ENST00000527413 FAM74A1Q5RGS3 127 aa9.4□□□□□ -0.9
SSSCA1-204ENST00000527413 ZNF575Q86XF7 245 aa9.4□□□□□ -0.9
SSSCA1-204ENST00000527413 CMTM2Q8TAZ6 248 aa9.4□□□□□ -0.9
SSSCA1-204ENST00000527413 TMED6Q8WW62 240 aa9.4□□□□□ -0.9
SSSCA1-204ENST00000527413 PGPA6NDG6 321 aa9.39□□□□□ -0.91
SSSCA1-204ENST00000527413 OR10G4Q8NGN3 311 aa9.39□□□□□ -0.91
SSSCA1-204ENST00000527413 OR10G9Q8NGN4 311 aa9.39□□□□□ -0.91
SSSCA1-204ENST00000527413 OR10G7Q8NGN6 311 aa9.39□□□□□ -0.91
SSSCA1-204ENST00000527413 TRGV11A0A075B6L2 103 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 HMGB3O15347 200 aaKnown RBP9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 PAX4O43316 350 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 ARL14EPLP0DKL9 152 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 CDC34P49427 236 aaPredicted RBP9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 FAM159AQ6UWV7 190 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 GOLT1AQ6ZVE7 132 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 HSD17B11Q8NBQ5 300 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 OR2G3Q8NGZ4 309 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 AQP10Q96PS8 301 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 MED28Q9H204 178 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 MDFICQ9P1T7 246 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 PRO0255Q9UI72 69 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 ICOSQ9Y6W8 199 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 PCLOQ9Y6V0 5065 aa9.38□□□□□ -0.91
SSSCA1-204ENST00000527413 A0A1W2PPQ1 181 aa9.37□□□□□ -0.91
SSSCA1-204ENST00000527413 GNG5P63218 68 aa9.37□□□□□ -0.91
SSSCA1-204ENST00000527413 TMEM183BQ1AE95 376 aa9.37□□□□□ -0.91
SSSCA1-204ENST00000527413 TMEM183AQ8IXX5 376 aa9.37□□□□□ -0.91
SSSCA1-204ENST00000527413 ARL6IP6Q8N6S5 226 aa9.37□□□□□ -0.91
SSSCA1-204ENST00000527413 PSMG3Q9BT73 122 aaPredicted RBP9.37□□□□□ -0.91
SSSCA1-204ENST00000527413 NAGKQ9UJ70 344 aa9.37□□□□□ -0.91
SSSCA1-204ENST00000527413 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 F6UZH7 168 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 STAG3L2P0CL84 134 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 STAG3L3P0CL85 134 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 ATP6V0CP27449 155 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 CRYBA4P53673 196 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 SLAQ13239 276 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 FHL2Q14192 279 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 TDRG1Q3Y452 100 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 SPXQ9BT56 116 aa9.36□□□□□ -0.91
SSSCA1-204ENST00000527413 RYR1P21817 5038 aa9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 TRAV21A0A0B4J279 112 aa9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 GIPP09681 153 aaPredicted RBP9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 SFTA3P0C7M3 94 aa9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 RASL10AQ92737 203 aa9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 RAB24Q969Q5 203 aa9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 TVP23CQ96ET8 276 aa9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 TREM1Q9NP99 234 aa9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 HHLA3Q9XRX5 114 aa9.35□□□□□ -0.91
SSSCA1-204ENST00000527413 TRGV4A0A0C4DH28 118 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 GCHFRP30047 84 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 SERF2P84101 59 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 Q5BKY6 102 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 ASB13Q8WXK3 278 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 ZNF479Q96JC4 524 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
SSSCA1-204ENST00000527413 IGHV3-16A0A0C4DH30 117 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 SIVA1O15304 175 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 NXPH4O95158 308 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 MBP02144 154 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 TYMSP04818 313 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 IQCF2Q8IXL9 164 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 SUN5Q8TC36 379 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 SGK494Q96LW2 274 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms