RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 RPL29P47914 159 aaKnown RBP12.78□□□□□ -0.36
CAPN1-206ENST00000526966 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
CAPN1-206ENST00000526966 LYRM2Q9NU23 88 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-206ENST00000526966 UQCC1Q9NVA1 299 aa12.78□□□□□ -0.36
CAPN1-206ENST00000526966 TMEM14CQ9P0S9 112 aa12.78□□□□□ -0.36
CAPN1-206ENST00000526966 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
CAPN1-206ENST00000526966 A0A0D9SG52 128 aa12.77□□□□□ -0.37
CAPN1-206ENST00000526966 EREGO14944 169 aa12.77□□□□□ -0.37
CAPN1-206ENST00000526966 PAX4O43316 350 aa12.77□□□□□ -0.37
CAPN1-206ENST00000526966 CST7O76096 145 aa12.77□□□□□ -0.37
CAPN1-206ENST00000526966 PDE6HQ13956 83 aa12.77□□□□□ -0.37
CAPN1-206ENST00000526966 ZNF345Q14585 488 aa12.77□□□□□ -0.37
CAPN1-206ENST00000526966 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.37
CAPN1-206ENST00000526966 SLC39A9Q9NUM3 307 aa12.77□□□□□ -0.37
CAPN1-206ENST00000526966 MPDU1O75352 247 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 NMBP08949 121 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 INAFM2P0DMQ5 153 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 HIST1H1EP10412 219 aaKnown RBP12.76□□□□□ -0.37
CAPN1-206ENST00000526966 CAV2P51636 162 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 SLC51BQ86UW2 128 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 COMMD7Q86VX2 200 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 TMEM252Q8N6L7 170 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 VGLL1Q99990 258 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 MBD2Q9UBB5 411 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 PRO0255Q9UI72 69 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
CAPN1-206ENST00000526966 FLG2Q5D862 2391 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-206ENST00000526966 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
CAPN1-206ENST00000526966 TOR2AQ5JU69 321 aa12.75□□□□□ -0.37
CAPN1-206ENST00000526966 C9orf47Q6ZRZ4 202 aa12.75□□□□□ -0.37
CAPN1-206ENST00000526966 TMUB2Q71RG4 321 aa12.75□□□□□ -0.37
CAPN1-206ENST00000526966 NFE4Q86UQ8 179 aa12.75□□□□□ -0.37
CAPN1-206ENST00000526966 ZFAND2AQ8N6M9 145 aa12.75□□□□□ -0.37
CAPN1-206ENST00000526966 A0A087WTM6 91 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 UBE2L5PA0A1B0GUS4 154 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 IGSF23A1L1A6 192 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
CAPN1-206ENST00000526966 CRYBA4P53673 196 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 SLAQ13239 276 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 PRR9Q5T870 116 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 Q5VSD8 79 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 LYPD5Q6UWN5 251 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 PHYHIPLQ96FC7 376 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 SLC25A31Q9H0C2 315 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 MRPL16Q9NX20 251 aaKnown RBP12.74□□□□□ -0.37
CAPN1-206ENST00000526966 TP53TG3Q9ULZ0 132 aa12.74□□□□□ -0.37
CAPN1-206ENST00000526966 SRRM2Q9UQ35 2752 aaKnown RBP12.73□□□□□ -0.37
CAPN1-206ENST00000526966 IGHV3-53P01767 116 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 GPX1P07203 203 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 PYYP10082 97 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 SULT1A1P50225 295 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 KRTAP10-1P60331 282 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 BAXQ07812 192 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 FHL2Q14192 279 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 MRPL23Q16540 153 aaKnown RBP12.73□□□□□ -0.37
CAPN1-206ENST00000526966 STX12Q86Y82 276 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 EXOC3-AS1Q8N2X6 119 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 TIMM9Q9Y5J7 89 aa12.73□□□□□ -0.37
CAPN1-206ENST00000526966 IGHV1OR15-1A0A075B7D0 117 aa12.72□□□□□ -0.37
CAPN1-206ENST00000526966 Q6ZQT7 251 aa12.72□□□□□ -0.37
CAPN1-206ENST00000526966 HHLA3Q9XRX5 114 aa12.72□□□□□ -0.37
CAPN1-206ENST00000526966 IGKV2-40A0A087WW87 121 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-206ENST00000526966 FXYD6-FXYD2A0A087WZ82 144 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 ARPC5O15511 151 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 IGKV2D-40P01614 121 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-206ENST00000526966 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 NEGR1Q7Z3B1 354 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 SUN5Q8TC36 379 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 FRZBQ92765 325 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 AAMDCQ9H7C9 122 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 ZNF492Q9P255 531 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.37
CAPN1-206ENST00000526966 K7EP13 123 aa12.7□□□□□ -0.38
CAPN1-206ENST00000526966 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
CAPN1-206ENST00000526966 HBG1P69891 147 aa12.7□□□□□ -0.38
CAPN1-206ENST00000526966 HBG2P69892 147 aa12.7□□□□□ -0.38
CAPN1-206ENST00000526966 NHLH2Q02577 135 aa12.7□□□□□ -0.38
CAPN1-206ENST00000526966 ICAM4Q14773 271 aa12.7□□□□□ -0.38
CAPN1-206ENST00000526966 BLNKQ8WV28 456 aa12.7□□□□□ -0.38
CAPN1-206ENST00000526966 ARPC5LQ9BPX5 153 aa12.7□□□□□ -0.38
CAPN1-206ENST00000526966 SLC25A2Q9BXI2 301 aa12.7□□□□□ -0.38
CAPN1-206ENST00000526966 TRAV9-2A0A087WT02 112 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 TRBV7-9A0A0J9YWB2 115 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 IFNA5P01569 189 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 FGF7P21781 194 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 ZNF415Q09FC8 603 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 ATP6V1FQ16864 119 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 GCSAMLQ5JQS6 135 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 FAM167A-AS1Q96KT0 104 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 AQP10Q96PS8 301 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 MRPL32Q9BYC8 188 aaKnown RBP12.69□□□□□ -0.38
CAPN1-206ENST00000526966 TNFSF18Q9UNG2 199 aa12.69□□□□□ -0.38
CAPN1-206ENST00000526966 KANTRA0A1W2PQU2 76 aa12.68□□□□□ -0.38
CAPN1-206ENST00000526966 BCL2L11O43521 198 aa12.68□□□□□ -0.38
CAPN1-206ENST00000526966 FAM122CQ6P4D5 195 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms