RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 NOP10Q9NPE3 64 aaKnown RBP11.52□□□□□ -0.57
SSSCA1-202ENST00000526433 APLNQ9ULZ1 77 aa11.52□□□□□ -0.57
SSSCA1-202ENST00000526433 EPDR1Q9UM22 224 aa11.52□□□□□ -0.57
SSSCA1-202ENST00000526433 TRAV8-1A0A0A6YYK1 113 aa11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 GGTLC3B5MD39 225 aa11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 UMAD1C9J7I0 102 aa11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 LY6G6CO95867 125 aa11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 TCRAP04437 139 aa11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 HTN3P15516 51 aa11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 AKAP14Q86UN6 197 aa11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 EIF4E3Q8N5X7 224 aaKnown RBP11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 LINC00476Q8WZB0 136 aa11.51□□□□□ -0.57
SSSCA1-202ENST00000526433 IGHV4-4A0A075B6R2 117 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 SERTM2A0A1B0GWG4 89 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 CBY3A6NI87 242 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 RGS13O14921 159 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 TPT1P13693 172 aaKnown RBP11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 UBE2G2P60604 165 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 STOML3Q8TAV4 291 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 TVP23CQ96ET8 276 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 SGK494Q96LW2 274 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 VPS13DQ5THJ4 4388 aa11.5□□□□□ -0.57
SSSCA1-202ENST00000526433 IGHV1OR15-1A0A075B7D0 117 aa11.49□□□□□ -0.57
SSSCA1-202ENST00000526433 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
SSSCA1-202ENST00000526433 K7EQM0 130 aa11.49□□□□□ -0.57
SSSCA1-202ENST00000526433 ANXA2RQ3ZCQ2 193 aa11.49□□□□□ -0.57
SSSCA1-202ENST00000526433 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
SSSCA1-202ENST00000526433 MBD3L1Q8WWY6 194 aa11.49□□□□□ -0.57
SSSCA1-202ENST00000526433 TREM1Q9NP99 234 aa11.49□□□□□ -0.57
SSSCA1-202ENST00000526433 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 IFNA7P01567 189 aa11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 Q6AWC8 147 aa11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 LGALS9CQ6DKI2 356 aa11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 SFT2D1Q8WV19 159 aa11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 GSN-AS1Q9NRJ2 163 aa11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 TP53TG3Q9ULZ0 132 aa11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 PSG8Q9UQ74 426 aa11.48□□□□□ -0.57
SSSCA1-202ENST00000526433 HYDINQ4G0P3 5121 aa11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 A0A1B0GVG6 124 aa11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 DAZ2Q13117 558 aaKnown RBP11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 MUC21Q5SSG8 566 aa11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 DPPA3Q6W0C5 159 aa11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 CYB561D1Q8N8Q1 229 aa11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 C11orf72Q8NBR9 251 aa11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 NDUFAF3Q9BU61 184 aa11.47□□□□□ -0.57
SSSCA1-202ENST00000526433 IGLV2-11P01706 119 aa11.46□□□□□ -0.57
SSSCA1-202ENST00000526433 FLI1Q01543 452 aaPredicted RBP11.46□□□□□ -0.57
SSSCA1-202ENST00000526433 LINC00612Q8N6U2 182 aa11.46□□□□□ -0.57
SSSCA1-202ENST00000526433 FAM210BQ96KR6 192 aa11.46□□□□□ -0.57
SSSCA1-202ENST00000526433 ATG101Q9BSB4 218 aa11.46□□□□□ -0.57
SSSCA1-202ENST00000526433 NDFIP1Q9BT67 221 aa11.46□□□□□ -0.57
SSSCA1-202ENST00000526433 KLF12Q9Y4X4 402 aa11.46□□□□□ -0.57
SSSCA1-202ENST00000526433 A0A1B0GV50 99 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 GAGE12BA1L429 117 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 FBLL1A6NHQ2 334 aaKnown RBP11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 F6UZH7 168 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 GAGE7O76087 117 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 ATP5G1P05496 136 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 H2AFB1P0C5Y9 115 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 GAGE12FP0CL80 117 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 GAGE12GP0CL81 117 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 GAGE12IP0CL82 117 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 ATP5G3P48201 142 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 EIF5AL1Q6IS14 154 aaKnown RBP11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 PRNTQ86SH4 94 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 TMEM75Q8N9X5 138 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 LINC00479Q96M42 142 aa11.45□□□□□ -0.58
SSSCA1-202ENST00000526433 TRAV34A0A0B4J273 112 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 TRAV21A0A0B4J279 112 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 F5H768 121 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 PEX7O00628 323 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 TCL1AP56279 114 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 IBA57Q5T440 356 aaKnown RBP11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 CST9LP1Q5W188 147 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 FAM159AQ6UWV7 190 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 Q6ZTI0 123 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 SLC51BQ86UW2 128 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 HIST1H2BAQ96A08 127 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 C8orf49Q96NF6 230 aa11.44□□□□□ -0.58
SSSCA1-202ENST00000526433 PAGE4O60829 102 aa11.43□□□□□ -0.58
SSSCA1-202ENST00000526433 RAB5CP51148 216 aa11.43□□□□□ -0.58
SSSCA1-202ENST00000526433 SAPCD1Q5SSQ6 148 aa11.43□□□□□ -0.58
SSSCA1-202ENST00000526433 TMEM88Q6PEY1 159 aa11.43□□□□□ -0.58
SSSCA1-202ENST00000526433 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
SSSCA1-202ENST00000526433 NAGKQ9UJ70 344 aa11.43□□□□□ -0.58
SSSCA1-202ENST00000526433 SPINK4O60575 86 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 PPT1P50897 306 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 ZNF80P51504 273 aaPredicted RBP11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 TMEM183BQ1AE95 376 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 TDRG1Q3Y452 100 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 ZFP69Q49AA0 526 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 SMUG1Q53HV7 270 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 TMEM183AQ8IXX5 376 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 ARL2-SNX15V9GYD0 113 aa11.42□□□□□ -0.58
SSSCA1-202ENST00000526433 TRGV1A0A0A0MS02 117 aa11.41□□□□□ -0.58
SSSCA1-202ENST00000526433 GNRH2O43555 120 aa11.41□□□□□ -0.58
SSSCA1-202ENST00000526433 GCGP01275 180 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms