RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 MAP1LC3BQ9GZQ8 125 aa14.04□□□□□ -0.16
EXOSC4-202ENST00000525936 DEFB131BA0A096LNP1 70 aa14.03□□□□□ -0.16
EXOSC4-202ENST00000525936 TRAV8-1A0A0A6YYK1 113 aa14.03□□□□□ -0.16
EXOSC4-202ENST00000525936 ANXA2RQ3ZCQ2 193 aa14.03□□□□□ -0.16
EXOSC4-202ENST00000525936 DPPA3Q6W0C5 159 aa14.03□□□□□ -0.16
EXOSC4-202ENST00000525936 CCDC28AQ8IWP9 274 aa14.03□□□□□ -0.16
EXOSC4-202ENST00000525936 RPH3ALQ9UNE2 315 aa14.03□□□□□ -0.16
EXOSC4-202ENST00000525936 TIMM8BQ9Y5J9 83 aaPredicted RBP14.03□□□□□ -0.16
EXOSC4-202ENST00000525936 HYDINQ4G0P3 5121 aa14.03□□□□□ -0.16
EXOSC4-202ENST00000525936 FAM74A7A6NL05 159 aa14.02□□□□□ -0.17
EXOSC4-202ENST00000525936 IGLV2-11P01706 119 aa14.02□□□□□ -0.17
EXOSC4-202ENST00000525936 Q6AWC8 147 aa14.02□□□□□ -0.17
EXOSC4-202ENST00000525936 IQCF2Q8IXL9 164 aa14.02□□□□□ -0.17
EXOSC4-202ENST00000525936 NKX6-2Q9C056 277 aaPredicted RBP14.02□□□□□ -0.17
EXOSC4-202ENST00000525936 APLNQ9ULZ1 77 aa14.02□□□□□ -0.17
EXOSC4-202ENST00000525936 IGLL5B9A064 214 aa14.01□□□□□ -0.17
EXOSC4-202ENST00000525936 DAD1P61803 113 aa14.01□□□□□ -0.17
EXOSC4-202ENST00000525936 EIF4E3Q8N5X7 224 aaKnown RBP14.01□□□□□ -0.17
EXOSC4-202ENST00000525936 LINC00612Q8N6U2 182 aa14.01□□□□□ -0.17
EXOSC4-202ENST00000525936 C11orf72Q8NBR9 251 aa14.01□□□□□ -0.17
EXOSC4-202ENST00000525936 VPS13DQ5THJ4 4388 aa14.01□□□□□ -0.17
EXOSC4-202ENST00000525936 DAZ2Q13117 558 aaKnown RBP14□□□□□ -0.17
EXOSC4-202ENST00000525936 C9orf62Q8N4C0 152 aa14□□□□□ -0.17
EXOSC4-202ENST00000525936 FAM213BQ8TBF2 198 aa14□□□□□ -0.17
EXOSC4-202ENST00000525936 LINC00476Q8WZB0 136 aa14□□□□□ -0.17
EXOSC4-202ENST00000525936 ATG101Q9BSB4 218 aa14□□□□□ -0.17
EXOSC4-202ENST00000525936 NOP10Q9NPE3 64 aaKnown RBP14□□□□□ -0.17
EXOSC4-202ENST00000525936 IGHV1OR15-1A0A075B7D0 117 aa13.99□□□□□ -0.17
EXOSC4-202ENST00000525936 UBE2G2P60604 165 aa13.99□□□□□ -0.17
EXOSC4-202ENST00000525936 SLC51BQ86UW2 128 aa13.99□□□□□ -0.17
EXOSC4-202ENST00000525936 CYB561D1Q8N8Q1 229 aa13.99□□□□□ -0.17
EXOSC4-202ENST00000525936 ZNF680Q8NEM1 530 aa13.99□□□□□ -0.17
EXOSC4-202ENST00000525936 SFT2D1Q8WV19 159 aa13.99□□□□□ -0.17
EXOSC4-202ENST00000525936 ARL2-SNX15V9GYD0 113 aa13.99□□□□□ -0.17
EXOSC4-202ENST00000525936 IGHV4-4A0A075B6R2 117 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 FBLL1A6NHQ2 334 aaKnown RBP13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 CBY3A6NI87 242 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 K7EQM0 130 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 TMEM75Q8N9X5 138 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 FAM210BQ96KR6 192 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 SGK494Q96LW2 274 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 TREM1Q9NP99 234 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 TP53TG3Q9ULZ0 132 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 PSG8Q9UQ74 426 aa13.98□□□□□ -0.17
EXOSC4-202ENST00000525936 RGS13O14921 159 aa13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 DEFB130BP0DP73 79 aa13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 DEFB130AP0DP74 79 aa13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 RAB5CP51148 216 aa13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 TDRG1Q3Y452 100 aa13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 IBA57Q5T440 356 aaKnown RBP13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 EIF5AL1Q6IS14 154 aaKnown RBP13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 LINC00479Q96M42 142 aa13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 GSN-AS1Q9NRJ2 163 aa13.97□□□□□ -0.17
EXOSC4-202ENST00000525936 KMT2AQ03164 3969 aa13.96□□□□□ -0.17
EXOSC4-202ENST00000525936 SNURFLB1AK76 121 aa13.96□□□□□ -0.17
EXOSC4-202ENST00000525936 H2AFB1P0C5Y9 115 aa13.96□□□□□ -0.17
EXOSC4-202ENST00000525936 FLI1Q01543 452 aaPredicted RBP13.96□□□□□ -0.17
EXOSC4-202ENST00000525936 LGALS9CQ6DKI2 356 aa13.96□□□□□ -0.17
EXOSC4-202ENST00000525936 HIST1H2BAQ96A08 127 aa13.96□□□□□ -0.17
EXOSC4-202ENST00000525936 TRAV1-1A0A0B4J248 108 aa13.95□□□□□ -0.18
EXOSC4-202ENST00000525936 PEX7O00628 323 aa13.95□□□□□ -0.18
EXOSC4-202ENST00000525936 IFNA7P01567 189 aa13.95□□□□□ -0.18
EXOSC4-202ENST00000525936 SULT1A2P50226 295 aa13.95□□□□□ -0.18
EXOSC4-202ENST00000525936 ZFP69Q49AA0 526 aa13.95□□□□□ -0.18
EXOSC4-202ENST00000525936 TCEAL7Q9BRU2 100 aa13.95□□□□□ -0.18
EXOSC4-202ENST00000525936 TRAV21A0A0B4J279 112 aa13.94□□□□□ -0.18
EXOSC4-202ENST00000525936 TCL1AP56279 114 aa13.94□□□□□ -0.18
EXOSC4-202ENST00000525936 KLF12Q9Y4X4 402 aa13.94□□□□□ -0.18
EXOSC4-202ENST00000525936 F6UZH7 168 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 SPINK4O60575 86 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 PAGE4O60829 102 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 ZNF80P51504 273 aaPredicted RBP13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 MUC21Q5SSG8 566 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 SAPCD1Q5SSQ6 148 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 PRNTQ86SH4 94 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 C18orf15Q96N68 181 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 C8orf49Q96NF6 230 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 NDFIP1Q9BT67 221 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 NDUFAF3Q9BU61 184 aa13.93□□□□□ -0.18
EXOSC4-202ENST00000525936 TRAV34A0A0B4J273 112 aa13.92□□□□□ -0.18
EXOSC4-202ENST00000525936 LY6G6CO95867 125 aa13.92□□□□□ -0.18
EXOSC4-202ENST00000525936 ATP5G1P05496 136 aa13.92□□□□□ -0.18
EXOSC4-202ENST00000525936 HTN3P15516 51 aa13.92□□□□□ -0.18
EXOSC4-202ENST00000525936 ATP5G3P48201 142 aa13.92□□□□□ -0.18
EXOSC4-202ENST00000525936 FAM159AQ6UWV7 190 aa13.92□□□□□ -0.18
EXOSC4-202ENST00000525936 Q6ZTI0 123 aa13.92□□□□□ -0.18
EXOSC4-202ENST00000525936 MDFICQ9P1T7 246 aa13.92□□□□□ -0.18
EXOSC4-202ENST00000525936 PPT1P50897 306 aa13.91□□□□□ -0.18
EXOSC4-202ENST00000525936 CCL20P78556 96 aa13.91□□□□□ -0.18
EXOSC4-202ENST00000525936 LGALS9BQ3B8N2 356 aa13.91□□□□□ -0.18
EXOSC4-202ENST00000525936 CST9LP1Q5W188 147 aa13.91□□□□□ -0.18
EXOSC4-202ENST00000525936 COX8CQ7Z4L0 72 aa13.91□□□□□ -0.18
EXOSC4-202ENST00000525936 TRBV6-1A0A0K0K1D8 114 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 A0A1B0GV50 99 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 GAGE12BA1L429 117 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 GAGE7O76087 117 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 GAGE12FP0CL80 117 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 GAGE12GP0CL81 117 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 GAGE12IP0CL82 117 aa13.9□□□□□ -0.18
EXOSC4-202ENST00000525936 SMUG1Q53HV7 270 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms