RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 EIF5AL1Q6IS14 154 aaKnown RBP8.66□□□□□ -1.02
CCDC90B-205ENST00000525916 DPPA3Q6W0C5 159 aa8.66□□□□□ -1.02
CCDC90B-205ENST00000525916 TMED6Q8WW62 240 aa8.66□□□□□ -1.02
CCDC90B-205ENST00000525916 PRELID1Q9Y255 219 aa8.66□□□□□ -1.02
CCDC90B-205ENST00000525916 PLAC8L1A1L4L8 177 aa8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 CXorf1O96002 111 aa8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 GCHFRP30047 84 aa8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 AMTNQ6UX39 209 aa8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 ZNF738Q8NE65 137 aa8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 BLNKQ8WV28 456 aa8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 PHYHIPLQ96FC7 376 aa8.65□□□□□ -1.02
CCDC90B-205ENST00000525916 M0R2Z0 102 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 AZU1P20160 251 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 FHITP49789 147 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 SULT1A2P50226 295 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 RAB5CP51148 216 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 SPINK13Q1W4C9 94 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 EXOC3-AS1Q8N2X6 119 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 OR8A1Q8NGG7 326 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 TMEM167BQ9NRX6 74 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
CCDC90B-205ENST00000525916 MAP1LC3B2A6NCE7 125 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 CBY3A6NI87 242 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 PRAC2D3DTV9 90 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 M0R3E3 92 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 CRXO43186 299 aaPredicted RBP8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 DUSP14O95147 198 aaKnown RBP8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 INSP01308 110 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 ICAM4Q14773 271 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 ARL6IP6Q8N6S5 226 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 MAP1LC3BQ9GZQ8 125 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
CCDC90B-205ENST00000525916 A0A1W2PPQ1 181 aa8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 TSPOP30536 169 aa8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 CNN1P51911 297 aaKnown RBP8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 LINC00315P59091 139 aa8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 RANP62826 216 aaKnown RBP8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 FAM213BQ8TBF2 198 aa8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 OTORQ9NRC9 128 aa8.62□□□□□ -1.03
CCDC90B-205ENST00000525916 TRAV12-2A0A075B6T6 113 aa8.61□□□□□ -1.03
CCDC90B-205ENST00000525916 TRAV1-1A0A0B4J248 108 aa8.61□□□□□ -1.03
CCDC90B-205ENST00000525916 BOLA2-SMG1P6H3BVE0 249 aa8.61□□□□□ -1.03
CCDC90B-205ENST00000525916 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-205ENST00000525916 FGF8P55075 233 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-205ENST00000525916 TMPRSS5Q9H3S3 457 aa8.61□□□□□ -1.03
CCDC90B-205ENST00000525916 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
CCDC90B-205ENST00000525916 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
CCDC90B-205ENST00000525916 TRAV26-1A0A087WT03 109 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 A0A0J9YY99 117 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 PGPA6NDG6 321 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 NPIPB6E9PJ23 425 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 H2AFB1P0C5Y9 115 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 KRTAP10-1P60331 282 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 HIST1H1AQ02539 215 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 OR5I1Q13606 314 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 ESRGQ1W209 222 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 OR10J6PQ8NGY7 276 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 SFT2D1Q8WV19 159 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 ARL2-SNX15V9GYD0 113 aa8.6□□□□□ -1.03
CCDC90B-205ENST00000525916 RBAKDNA6NC62 111 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 GGTLC3B5MD39 225 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 DIRC3C9JPN6 131 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 J3QL48 77 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 SLC25A5P05141 298 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 CSN1S1P47710 185 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 FAM74A1Q5RGS3 127 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 CDPF1Q6NVV7 123 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 C9orf47Q6ZRZ4 202 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 ODF3Q96PU9 254 aa8.59□□□□□ -1.03
CCDC90B-205ENST00000525916 FAM74A7A6NL05 159 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 CT45A10P0DMU9 189 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 PRB4P10163 310 aaPredicted RBP8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 HTN1P15515 57 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 ERVFC1-1P60608 527 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 HAMPP81172 84 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 ALKAL2Q6UX46 152 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 C5orf17Q8NAS9 161 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 C16orf74Q96GX8 76 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 FAM19A4Q96LR4 140 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 LINC00477Q96M19 166 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 LINC01587Q99440 93 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 NKX6-2Q9C056 277 aaPredicted RBP8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 NOP10Q9NPE3 64 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 PPP1R14DQ9NXH3 145 aa8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
CCDC90B-205ENST00000525916 IGKV2-40A0A087WW87 121 aaPredicted RBP8.57□□□□□ -1.04
CCDC90B-205ENST00000525916 EREGO14944 169 aa8.57□□□□□ -1.04
CCDC90B-205ENST00000525916 IGKV2D-40P01614 121 aaPredicted RBP8.57□□□□□ -1.04
CCDC90B-205ENST00000525916 DNAH10OSP0CZ25 163 aa8.57□□□□□ -1.04
CCDC90B-205ENST00000525916 HOXA5P20719 270 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms